==269126== Memcheck, a memory error detector ==269126== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==269126== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==269126== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==269126== Parent PID: 266982 ==269126== ==269126== ==269126== FILE DESCRIPTORS: 9 open (3 std) at exit. ==269126== Open file descriptor 12: ==269126== at 0xF97022D: pipe (pipe.c:29) ==269126== by 0x1976807D: ??? ==269126== by 0x14D054CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269126== by 0x1122F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269126== by 0x111C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269126== by 0xFEBDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==269126== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269126== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269126== by 0x226492: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==269126== by 0x21FB31: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269126== by 0x223638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269126== by 0x2234D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269126== by 0x223B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269126== by 0x21DF15: main (TestOffLatticeSimulationWithPdes.cpp:19) ==269126== ==269126== Open file descriptor 8: /dev/shm/open_mpi.0000 ==269126== at 0xF974BCC: __open_nocancel (open64_nocancel.c:39) ==269126== by 0xF8F8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==269126== by 0xF4C2822: ??? ==269126== by 0xF4C296F: ??? ==269126== by 0x14DAC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269126== by 0x14DAC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269126== by 0x14D62922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269126== by 0x14D052DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269126== by 0x1122F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269126== by 0x111C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269126== by 0xFEBDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==269126== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269126== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269126== by 0x226492: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==269126== by 0x21FB31: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269126== by 0x223638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269126== by 0x2234D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269126== by 0x223B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269126== by 0x21DF15: main (TestOffLatticeSimulationWithPdes.cpp:19) ==269126== ==269126== Open file descriptor 116: ==269126== ==269126== ==269126== Open file descriptor 113: ==269126== ==269126== ==269126== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==269126== ==269126== ==269126== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==269126== ==269126== ==269126== ==269126== HEAP SUMMARY: ==269126== in use at exit: 857,959 bytes in 12,109 blocks ==269126== total heap usage: 5,973,732 allocs, 5,961,623 frees, 2,782,443,482 bytes allocated ==269126== ==269126== LEAK SUMMARY: ==269126== definitely lost: 0 bytes in 0 blocks ==269126== indirectly lost: 0 bytes in 0 blocks ==269126== possibly lost: 0 bytes in 0 blocks ==269126== still reachable: 56 bytes in 3 blocks ==269126== suppressed: 857,903 bytes in 12,106 blocks ==269126== Reachable blocks (those to which a pointer was found) are not shown. ==269126== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==269126== ==269126== For lists of detected and suppressed errors, rerun with: -s ==269126== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)