==275898== Memcheck, a memory error detector ==275898== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==275898== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==275898== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==275898== Parent PID: 266982 ==275898== ==275898== ==275898== FILE DESCRIPTORS: 9 open (3 std) at exit. ==275898== Open file descriptor 12: ==275898== at 0xF84522D: pipe (pipe.c:29) ==275898== by 0x1976807D: ??? ==275898== by 0x14D054CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==275898== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==275898== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==275898== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==275898== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==275898== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==275898== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==275898== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==275898== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==275898== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==275898== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==275898== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==275898== ==275898== Open file descriptor 8: /dev/shm/open_mpi.0000 ==275898== at 0xF849BCC: __open_nocancel (open64_nocancel.c:39) ==275898== by 0xF7CDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==275898== by 0xF4C2822: ??? ==275898== by 0xF4C296F: ??? ==275898== by 0x14DAC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==275898== by 0x14DAC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==275898== by 0x14D62922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==275898== by 0x14D052DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==275898== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==275898== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==275898== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==275898== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==275898== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==275898== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==275898== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==275898== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==275898== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==275898== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==275898== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==275898== ==275898== Open file descriptor 116: ==275898== ==275898== ==275898== Open file descriptor 113: ==275898== ==275898== ==275898== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==275898== ==275898== ==275898== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==275898== ==275898== ==275898== ==275898== HEAP SUMMARY: ==275898== in use at exit: 857,959 bytes in 12,109 blocks ==275898== total heap usage: 1,820,223 allocs, 1,808,114 frees, 1,867,676,842 bytes allocated ==275898== ==275898== LEAK SUMMARY: ==275898== definitely lost: 0 bytes in 0 blocks ==275898== indirectly lost: 0 bytes in 0 blocks ==275898== possibly lost: 0 bytes in 0 blocks ==275898== still reachable: 56 bytes in 3 blocks ==275898== suppressed: 857,903 bytes in 12,106 blocks ==275898== Reachable blocks (those to which a pointer was found) are not shown. ==275898== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==275898== ==275898== For lists of detected and suppressed errors, rerun with: -s ==275898== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)