==268366== Memcheck, a memory error detector ==268366== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==268366== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==268366== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==268366== Parent PID: 266982 ==268366== ==268366== ==268366== FILE DESCRIPTORS: 9 open (3 std) at exit. ==268366== Open file descriptor 12: ==268366== at 0x10CFC22D: pipe (pipe.c:29) ==268366== by 0x1976807D: ??? ==268366== by 0x14CB44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==268366== by 0x10949418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268366== by 0x108E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268366== by 0xF5B6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==268366== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==268366== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==268366== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==268366== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==268366== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==268366== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==268366== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==268366== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==268366== ==268366== Open file descriptor 8: /dev/shm/open_mpi.0000 ==268366== at 0x10D00BCC: __open_nocancel (open64_nocancel.c:39) ==268366== by 0x10C84C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==268366== by 0x10840822: ??? ==268366== by 0x1084096F: ??? ==268366== by 0x14D596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268366== by 0x14D59938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268366== by 0x14D0F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268366== by 0x14CB42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==268366== by 0x10949418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268366== by 0x108E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268366== by 0xF5B6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==268366== by 0xF48D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==268366== by 0xF48D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==268366== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==268366== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==268366== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==268366== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==268366== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==268366== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==268366== ==268366== Open file descriptor 116: ==268366== ==268366== ==268366== Open file descriptor 113: ==268366== ==268366== ==268366== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==268366== ==268366== ==268366== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==268366== ==268366== ==268366== ==268366== HEAP SUMMARY: ==268366== in use at exit: 857,959 bytes in 12,109 blocks ==268366== total heap usage: 7,555,735 allocs, 7,543,626 frees, 2,379,113,751 bytes allocated ==268366== ==268366== LEAK SUMMARY: ==268366== definitely lost: 0 bytes in 0 blocks ==268366== indirectly lost: 0 bytes in 0 blocks ==268366== possibly lost: 0 bytes in 0 blocks ==268366== still reachable: 56 bytes in 3 blocks ==268366== suppressed: 857,903 bytes in 12,106 blocks ==268366== Reachable blocks (those to which a pointer was found) are not shown. ==268366== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==268366== ==268366== For lists of detected and suppressed errors, rerun with: -s ==268366== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)