==301987== Memcheck, a memory error detector ==301987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==301987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==301987== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==301987== Parent PID: 300230 ==301987== ==301987== ==301987== FILE DESCRIPTORS: 9 open (3 std) at exit. ==301987== Open file descriptor 12: ==301987== at 0xF4EB22D: pipe (pipe.c:29) ==301987== by 0x1976807D: ??? ==301987== by 0x14D0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==301987== by 0x11148418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==301987== by 0x110E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==301987== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==301987== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==301987== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==301987== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==301987== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==301987== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==301987== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==301987== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==301987== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==301987== ==301987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==301987== at 0xF4EFBCC: __open_nocancel (open64_nocancel.c:39) ==301987== by 0xF473C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==301987== by 0xF126822: ??? ==301987== by 0xF12696F: ??? ==301987== by 0x14DB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==301987== by 0x14DB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==301987== by 0x14D68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==301987== by 0x14D0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==301987== by 0x11148418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==301987== by 0x110E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==301987== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==301987== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==301987== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==301987== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==301987== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==301987== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==301987== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==301987== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==301987== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==301987== ==301987== Open file descriptor 116: ==301987== ==301987== ==301987== Open file descriptor 113: ==301987== ==301987== ==301987== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==301987== ==301987== ==301987== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==301987== ==301987== ==301987== ==301987== HEAP SUMMARY: ==301987== in use at exit: 858,019 bytes in 12,113 blocks ==301987== total heap usage: 84,028 allocs, 71,915 frees, 1,551,798,025 bytes allocated ==301987== ==301987== LEAK SUMMARY: ==301987== definitely lost: 0 bytes in 0 blocks ==301987== indirectly lost: 0 bytes in 0 blocks ==301987== possibly lost: 0 bytes in 0 blocks ==301987== still reachable: 56 bytes in 3 blocks ==301987== suppressed: 857,963 bytes in 12,110 blocks ==301987== Reachable blocks (those to which a pointer was found) are not shown. ==301987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==301987== ==301987== For lists of detected and suppressed errors, rerun with: -s ==301987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)