==307854== Memcheck, a memory error detector ==307854== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==307854== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==307854== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==307854== Parent PID: 300230 ==307854== ==307854== ==307854== FILE DESCRIPTORS: 9 open (3 std) at exit. ==307854== Open file descriptor 12: ==307854== at 0x109A222D: pipe (pipe.c:29) ==307854== by 0x1976907D: ??? ==307854== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307854== by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307854== by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307854== by 0xF27FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==307854== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307854== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307854== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307854== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307854== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307854== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307854== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307854== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==307854== ==307854== Open file descriptor 8: /dev/shm/open_mpi.0000 ==307854== at 0x109A6BCC: __open_nocancel (open64_nocancel.c:39) ==307854== by 0x1092AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==307854== by 0xF126822: ??? ==307854== by 0xF12696F: ??? ==307854== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307854== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307854== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307854== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307854== by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307854== by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307854== by 0xF27FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==307854== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307854== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307854== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307854== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307854== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307854== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307854== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307854== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==307854== ==307854== Open file descriptor 116: ==307854== ==307854== ==307854== Open file descriptor 113: ==307854== ==307854== ==307854== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==307854== ==307854== ==307854== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==307854== ==307854== ==307854== ==307854== HEAP SUMMARY: ==307854== in use at exit: 858,019 bytes in 12,113 blocks ==307854== total heap usage: 500,645 allocs, 488,532 frees, 1,854,170,899 bytes allocated ==307854== ==307854== LEAK SUMMARY: ==307854== definitely lost: 0 bytes in 0 blocks ==307854== indirectly lost: 0 bytes in 0 blocks ==307854== possibly lost: 0 bytes in 0 blocks ==307854== still reachable: 56 bytes in 3 blocks ==307854== suppressed: 857,963 bytes in 12,110 blocks ==307854== Reachable blocks (those to which a pointer was found) are not shown. ==307854== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==307854== ==307854== For lists of detected and suppressed errors, rerun with: -s ==307854== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)