==302339== Memcheck, a memory error detector
==302339== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==302339== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==302339== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestImmersedBoundarySimulationModifier -malloc_debug -malloc_dump -memory_info
==302339== Parent PID: 300230
==302339== 
==302339== 
==302339== FILE DESCRIPTORS: 9 open (3 std) at exit.
==302339== Open file descriptor 12:
==302339==    at 0x109A222D: pipe (pipe.c:29)
==302339==    by 0x1976907D: ???
==302339==    by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==302339==    by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==302339==    by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==302339==    by 0xF27FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5)
==302339==    by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==302339==    by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==302339==    by 0x1500A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==302339==    by 0x14898D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==302339==    by 0x14B9FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
==302339== Open file descriptor 8: /dev/shm/open_mpi.0000
==302339==    at 0x109A6BCC: __open_nocancel (open64_nocancel.c:39)
==302339==    by 0x1092AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==302339==    by 0xF126822: ???
==302339==    by 0xF12696F: ???
==302339==    by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==302339==    by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==302339==    by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==302339==    by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==302339==    by 0x105EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==302339==    by 0x10588D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==302339==    by 0xF27FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5)
==302339==    by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==302339==    by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==302339==    by 0x1500A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==302339==    by 0x14898D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==302339==    by 0x14B9FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
==302339== Open file descriptor 116:
==302339==    <inherited from parent>
==302339== 
==302339== Open file descriptor 113:
==302339==    <inherited from parent>
==302339== 
==302339== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestImmersedBoundarySimulationModifier_valgrind.txt
==302339==    <inherited from parent>
==302339== 
==302339== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==302339==    <inherited from parent>
==302339== 
==302339== 
==302339== HEAP SUMMARY:
==302339==     in use at exit: 858,151 bytes in 12,113 blocks
==302339==   total heap usage: 2,843,912 allocs, 2,831,799 frees, 1,758,770,830 bytes allocated
==302339== 
==302339== 48 bytes in 1 blocks are definitely lost in loss record 21 of 46
==302339==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==302339==    by 0xE6D8ACD: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:134)
==302339==    by 0x158839: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:354)
==302339==    by 0x165DE8: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==302339==    by 0x148071: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==302339==    by 0x14BCAC: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==302339==    by 0x14BB91: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==302339==    by 0x14BA37: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==302339== 48 bytes in 1 blocks are definitely lost in loss record 22 of 46
==302339==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==302339==    by 0xE6D8C47: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:154)
==302339==    by 0x158839: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:354)
==302339==    by 0x165DE8: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==302339==    by 0x148071: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==302339==    by 0x14BCAC: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==302339==    by 0x14BB91: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==302339==    by 0x14BA37: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==302339== 48 bytes in 1 blocks are definitely lost in loss record 23 of 46
==302339==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==302339==    by 0xE6D8ACD: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:134)
==302339==    by 0x159AA7: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:425)
==302339==    by 0x165DE8: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==302339==    by 0x148071: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==302339==    by 0x14BCAC: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==302339==    by 0x14BB91: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==302339==    by 0x14BA37: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==302339== 48 bytes in 1 blocks are definitely lost in loss record 24 of 46
==302339==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==302339==    by 0xE6D8C47: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:154)
==302339==    by 0x159AA7: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:425)
==302339==    by 0x165DE8: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==302339==    by 0x148071: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==302339==    by 0x14BCAC: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==302339==    by 0x14BB91: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==302339==    by 0x14BA37: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==302339==    by 0x14B89E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==302339==    by 0x14BF35: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==302339==    by 0x146DB5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==302339== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==302339== LEAK SUMMARY:
==302339==    definitely lost: 192 bytes in 4 blocks
==302339==    indirectly lost: 0 bytes in 0 blocks
==302339==      possibly lost: 0 bytes in 0 blocks
==302339==    still reachable: 56 bytes in 3 blocks
==302339==         suppressed: 857,903 bytes in 12,106 blocks
==302339== Reachable blocks (those to which a pointer was found) are not shown.
==302339== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==302339== 
==302339== For lists of detected and suppressed errors, rerun with: -s
==302339== ERROR SUMMARY: 4 errors from 4 contexts (suppressed: 19 from 19)