==302642== Memcheck, a memory error detector ==302642== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==302642== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==302642== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==302642== Parent PID: 300230 ==302642== ==302642== ==302642== FILE DESCRIPTORS: 9 open (3 std) at exit. ==302642== Open file descriptor 12: ==302642== at 0xFD9522D: pipe (pipe.c:29) ==302642== by 0x1976A07D: ??? ==302642== by 0x14E7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==302642== by 0x119F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==302642== by 0x11989D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==302642== by 0x10680D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==302642== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==302642== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==302642== by 0x1D43E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==302642== by 0x1CDD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==302642== by 0x1D14B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==302642== by 0x1D1350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==302642== by 0x1D19E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==302642== by 0x1CC195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==302642== ==302642== Open file descriptor 8: /dev/shm/open_mpi.0000 ==302642== at 0xFD99BCC: __open_nocancel (open64_nocancel.c:39) ==302642== by 0xFD1DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==302642== by 0xF126822: ??? ==302642== by 0xF12696F: ??? ==302642== by 0x14F1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==302642== by 0x14F1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==302642== by 0x14ED5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==302642== by 0x14E7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==302642== by 0x119F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==302642== by 0x11989D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==302642== by 0x10680D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==302642== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==302642== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==302642== by 0x1D43E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==302642== by 0x1CDD79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==302642== by 0x1D14B0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==302642== by 0x1D1350: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==302642== by 0x1D19E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==302642== by 0x1CC195: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==302642== ==302642== Open file descriptor 116: ==302642== ==302642== ==302642== Open file descriptor 113: ==302642== ==302642== ==302642== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==302642== ==302642== ==302642== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==302642== ==302642== ==302642== ==302642== HEAP SUMMARY: ==302642== in use at exit: 857,959 bytes in 12,109 blocks ==302642== total heap usage: 6,852,646 allocs, 6,840,537 frees, 8,269,697,314 bytes allocated ==302642== ==302642== LEAK SUMMARY: ==302642== definitely lost: 0 bytes in 0 blocks ==302642== indirectly lost: 0 bytes in 0 blocks ==302642== possibly lost: 0 bytes in 0 blocks ==302642== still reachable: 56 bytes in 3 blocks ==302642== suppressed: 857,903 bytes in 12,106 blocks ==302642== Reachable blocks (those to which a pointer was found) are not shown. ==302642== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==302642== ==302642== For lists of detected and suppressed errors, rerun with: -s ==302642== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)