==309729== Memcheck, a memory error detector ==309729== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309729== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309729== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==309729== Parent PID: 300230 ==309729== ==309729== ==309729== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309729== Open file descriptor 12: ==309729== at 0x1221F22D: pipe (pipe.c:29) ==309729== by 0x1B42A07D: ??? ==309729== by 0x165734CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309729== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309729== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309729== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309729== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309729== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309729== by 0x123DF1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309729== by 0x11F6D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309729== by 0x1218D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309729== by 0x1217D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309729== by 0x121DE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309729== by 0x11DED5: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==309729== ==309729== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309729== at 0x12223BCC: __open_nocancel (open64_nocancel.c:39) ==309729== by 0x121A7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309729== by 0x11D63822: ??? ==309729== by 0x11D6396F: ??? ==309729== by 0x1661A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309729== by 0x1661A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309729== by 0x165D0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309729== by 0x165732DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309729== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309729== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309729== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309729== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309729== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309729== by 0x123DF1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309729== by 0x11F6D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309729== by 0x1218D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309729== by 0x1217D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309729== by 0x121DE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309729== by 0x11DED5: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==309729== ==309729== Open file descriptor 116: ==309729== ==309729== ==309729== Open file descriptor 113: ==309729== ==309729== ==309729== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==309729== ==309729== ==309729== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309729== ==309729== ==309729== ==309729== HEAP SUMMARY: ==309729== in use at exit: 857,975 bytes in 12,109 blocks ==309729== total heap usage: 16,194,868 allocs, 16,182,759 frees, 3,034,403,766 bytes allocated ==309729== ==309729== LEAK SUMMARY: ==309729== definitely lost: 0 bytes in 0 blocks ==309729== indirectly lost: 0 bytes in 0 blocks ==309729== possibly lost: 0 bytes in 0 blocks ==309729== still reachable: 56 bytes in 3 blocks ==309729== suppressed: 857,919 bytes in 12,106 blocks ==309729== Reachable blocks (those to which a pointer was found) are not shown. ==309729== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309729== ==309729== For lists of detected and suppressed errors, rerun with: -s ==309729== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)