==309281== Memcheck, a memory error detector ==309281== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309281== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309281== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==309281== Parent PID: 300230 ==309281== ==309281== ==309281== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309281== Open file descriptor 12: ==309281== at 0xF4A922D: pipe (pipe.c:29) ==309281== by 0x1976807D: ??? ==309281== by 0x14D0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309281== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309281== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309281== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309281== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309281== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309281== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309281== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309281== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309281== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309281== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309281== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==309281== ==309281== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309281== at 0xF4ADBCC: __open_nocancel (open64_nocancel.c:39) ==309281== by 0xF431C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309281== by 0xF126822: ??? ==309281== by 0xF12696F: ??? ==309281== by 0x14DB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309281== by 0x14DB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309281== by 0x14D68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309281== by 0x14D0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309281== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309281== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309281== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309281== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309281== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309281== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309281== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309281== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309281== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309281== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309281== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==309281== ==309281== Open file descriptor 116: ==309281== ==309281== ==309281== Open file descriptor 113: ==309281== ==309281== ==309281== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==309281== ==309281== ==309281== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309281== ==309281== ==309281== ==309281== HEAP SUMMARY: ==309281== in use at exit: 857,959 bytes in 12,109 blocks ==309281== total heap usage: 5,103,149 allocs, 5,091,040 frees, 1,978,205,146 bytes allocated ==309281== ==309281== LEAK SUMMARY: ==309281== definitely lost: 0 bytes in 0 blocks ==309281== indirectly lost: 0 bytes in 0 blocks ==309281== possibly lost: 0 bytes in 0 blocks ==309281== still reachable: 56 bytes in 3 blocks ==309281== suppressed: 857,903 bytes in 12,106 blocks ==309281== Reachable blocks (those to which a pointer was found) are not shown. ==309281== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309281== ==309281== For lists of detected and suppressed errors, rerun with: -s ==309281== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)