==309368== Memcheck, a memory error detector ==309368== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309368== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309368== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==309368== Parent PID: 300230 ==309368== ==309368== ==309368== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309368== Open file descriptor 12: ==309368== at 0xF59022D: pipe (pipe.c:29) ==309368== by 0x1976807D: ??? ==309368== by 0x14D0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309368== by 0x1122F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309368== by 0x111C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309368== by 0xFEBFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309368== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309368== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309368== by 0x12C594: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309368== by 0x127B6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309368== by 0x12A1B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309368== by 0x12A058: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309368== by 0x12A6EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309368== by 0x125F95: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==309368== ==309368== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309368== at 0xF594BCC: __open_nocancel (open64_nocancel.c:39) ==309368== by 0xF518C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309368== by 0xF126822: ??? ==309368== by 0xF12696F: ??? ==309368== by 0x14DB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309368== by 0x14DB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309368== by 0x14D68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309368== by 0x14D0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309368== by 0x1122F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309368== by 0x111C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309368== by 0xFEBFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309368== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309368== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309368== by 0x12C594: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309368== by 0x127B6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309368== by 0x12A1B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309368== by 0x12A058: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309368== by 0x12A6EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309368== by 0x125F95: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==309368== ==309368== Open file descriptor 116: ==309368== ==309368== ==309368== Open file descriptor 113: ==309368== ==309368== ==309368== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==309368== ==309368== ==309368== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309368== ==309368== ==309368== ==309368== HEAP SUMMARY: ==309368== in use at exit: 858,019 bytes in 12,113 blocks ==309368== total heap usage: 651,811 allocs, 639,698 frees, 1,927,154,483 bytes allocated ==309368== ==309368== LEAK SUMMARY: ==309368== definitely lost: 0 bytes in 0 blocks ==309368== indirectly lost: 0 bytes in 0 blocks ==309368== possibly lost: 0 bytes in 0 blocks ==309368== still reachable: 56 bytes in 3 blocks ==309368== suppressed: 857,963 bytes in 12,110 blocks ==309368== Reachable blocks (those to which a pointer was found) are not shown. ==309368== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309368== ==309368== For lists of detected and suppressed errors, rerun with: -s ==309368== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)