==309377== Memcheck, a memory error detector ==309377== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309377== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309377== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==309377== Parent PID: 300230 ==309377== ==309377== ==309377== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309377== Open file descriptor 12: ==309377== at 0xD85722D: pipe (pipe.c:29) ==309377== by 0x1976907D: ??? ==309377== by 0x14D084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309377== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309377== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309377== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309377== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309377== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309377== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309377== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309377== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309377== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309377== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309377== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==309377== ==309377== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309377== at 0xD85BBCC: __open_nocancel (open64_nocancel.c:39) ==309377== by 0xD7DFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309377== by 0xD4D2822: ??? ==309377== by 0xD4D296F: ??? ==309377== by 0x14DAD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309377== by 0x14DAD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309377== by 0x14D63922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309377== by 0x14D082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309377== by 0x11146418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309377== by 0x110DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309377== by 0xFDD6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309377== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309377== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309377== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==309377== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309377== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309377== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309377== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309377== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==309377== ==309377== Open file descriptor 116: ==309377== ==309377== ==309377== Open file descriptor 113: ==309377== ==309377== ==309377== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==309377== ==309377== ==309377== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309377== ==309377== ==309377== ==309377== HEAP SUMMARY: ==309377== in use at exit: 857,959 bytes in 12,109 blocks ==309377== total heap usage: 37,229,813 allocs, 37,217,704 frees, 3,890,123,300 bytes allocated ==309377== ==309377== LEAK SUMMARY: ==309377== definitely lost: 0 bytes in 0 blocks ==309377== indirectly lost: 0 bytes in 0 blocks ==309377== possibly lost: 0 bytes in 0 blocks ==309377== still reachable: 56 bytes in 3 blocks ==309377== suppressed: 857,903 bytes in 12,106 blocks ==309377== Reachable blocks (those to which a pointer was found) are not shown. ==309377== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309377== ==309377== For lists of detected and suppressed errors, rerun with: -s ==309377== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)