==309809== Memcheck, a memory error detector ==309809== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309809== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309809== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==309809== Parent PID: 300230 ==309809== ==309809== ==309809== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309809== Open file descriptor 12: ==309809== at 0x1221F22D: pipe (pipe.c:29) ==309809== by 0x1B42A07D: ??? ==309809== by 0x165734CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309809== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309809== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309809== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309809== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309809== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309809== by 0x11FCFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309809== by 0x11B5D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309809== by 0x11D80A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309809== by 0x11D706: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309809== by 0x11DD19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309809== by 0x119DD5: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==309809== ==309809== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309809== at 0x12223BCC: __open_nocancel (open64_nocancel.c:39) ==309809== by 0x121A7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309809== by 0x11D63822: ??? ==309809== by 0x11D6396F: ??? ==309809== by 0x1661A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309809== by 0x1661A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309809== by 0x165D0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309809== by 0x165732DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309809== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309809== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309809== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309809== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309809== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309809== by 0x11FCFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309809== by 0x11B5D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309809== by 0x11D80A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309809== by 0x11D706: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309809== by 0x11DD19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309809== by 0x119DD5: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==309809== ==309809== Open file descriptor 116: ==309809== ==309809== ==309809== Open file descriptor 113: ==309809== ==309809== ==309809== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==309809== ==309809== ==309809== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309809== ==309809== ==309809== ==309809== HEAP SUMMARY: ==309809== in use at exit: 858,115 bytes in 12,114 blocks ==309809== total heap usage: 1,401,842 allocs, 1,389,728 frees, 1,653,139,513 bytes allocated ==309809== ==309809== LEAK SUMMARY: ==309809== definitely lost: 0 bytes in 0 blocks ==309809== indirectly lost: 0 bytes in 0 blocks ==309809== possibly lost: 0 bytes in 0 blocks ==309809== still reachable: 136 bytes in 4 blocks ==309809== suppressed: 857,979 bytes in 12,110 blocks ==309809== Reachable blocks (those to which a pointer was found) are not shown. ==309809== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309809== ==309809== For lists of detected and suppressed errors, rerun with: -s ==309809== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)