==309608== Memcheck, a memory error detector ==309608== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==309608== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==309608== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==309608== Parent PID: 300230 ==309608== ==309608== ==309608== FILE DESCRIPTORS: 9 open (3 std) at exit. ==309608== Open file descriptor 12: ==309608== at 0x1221F22D: pipe (pipe.c:29) ==309608== by 0x1B42A07D: ??? ==309608== by 0x165734CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309608== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309608== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309608== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309608== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309608== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309608== by 0x11D8AF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309608== by 0x1190F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309608== by 0x11B488: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309608== by 0x11B383: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309608== by 0x11B997: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309608== by 0x1178F5: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==309608== ==309608== Open file descriptor 8: /dev/shm/open_mpi.0000 ==309608== at 0x12223BCC: __open_nocancel (open64_nocancel.c:39) ==309608== by 0x121A7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==309608== by 0x11D63822: ??? ==309608== by 0x11D6396F: ??? ==309608== by 0x1661A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309608== by 0x1661A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309608== by 0x165D0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==309608== by 0x165732DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==309608== by 0x11E6C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309608== by 0x11E05D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==309608== by 0x10AD9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==309608== by 0x109B02DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==309608== by 0x109B032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==309608== by 0x11D8AF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==309608== by 0x1190F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==309608== by 0x11B488: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==309608== by 0x11B383: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==309608== by 0x11B997: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==309608== by 0x1178F5: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==309608== ==309608== Open file descriptor 116: ==309608== ==309608== ==309608== Open file descriptor 113: ==309608== ==309608== ==309608== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==309608== ==309608== ==309608== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==309608== ==309608== ==309608== ==309608== HEAP SUMMARY: ==309608== in use at exit: 858,115 bytes in 12,114 blocks ==309608== total heap usage: 62,541 allocs, 50,427 frees, 1,543,428,203 bytes allocated ==309608== ==309608== LEAK SUMMARY: ==309608== definitely lost: 0 bytes in 0 blocks ==309608== indirectly lost: 0 bytes in 0 blocks ==309608== possibly lost: 0 bytes in 0 blocks ==309608== still reachable: 136 bytes in 4 blocks ==309608== suppressed: 857,979 bytes in 12,110 blocks ==309608== Reachable blocks (those to which a pointer was found) are not shown. ==309608== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==309608== ==309608== For lists of detected and suppressed errors, rerun with: -s ==309608== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)