==692233== Memcheck, a memory error detector ==692233== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692233== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692233== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestAbstractFunctionalCalculator -malloc_debug -malloc_dump -memory_info ==692233== Parent PID: 691175 ==692233== ==692233== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints. ==692233== This could cause spurious value errors to appear. ==692233== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==692233== Warning: noted but unhandled ioctl 0x27 with no size/direction hints. ==692233== This could cause spurious value errors to appear. ==692233== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==692233== Warning: noted but unhandled ioctl 0x25 with no size/direction hints. ==692233== This could cause spurious value errors to appear. ==692233== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==692233== Warning: noted but unhandled ioctl 0x17 with no size/direction hints. ==692233== This could cause spurious value errors to appear. ==692233== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==692233== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess) ==692233== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess) ==692233== Warning: set address range perms: large range [0x1391f000, 0x3391e000) (noaccess) ==692233== ==692233== FILE DESCRIPTORS: 14 open (3 std) at exit. ==692233== Open file descriptor 23: /dev/nvidia0 ==692233== at 0x858D7A4: open (open64.c:41) ==692233== by 0x129CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x12A66B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x12954026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1295D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x12A5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1281A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x127648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0xB8D6023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0xB8D6FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0x104DE46A: ??? ==692233== by 0xBF27F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBF03B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBEB4CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBDE1EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x104CCF03: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 22: /dev/nvidia0 ==692233== at 0x858D7A4: open (open64.c:41) ==692233== by 0x129CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1295407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1295D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x12A5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1281A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x127648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0xB8D6023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0xB8D6FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0x104DE46A: ??? ==692233== by 0xBF27F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBF03B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBEB4CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBDE1EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x104CCF03: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 21: /dev/nvidia0 ==692233== at 0x858D7A4: open (open64.c:41) ==692233== by 0x129CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1295DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x12A5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1281A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x127648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0xB8D6023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0xB8D6FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0x104DE46A: ??? ==692233== by 0xBF27F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBF03B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBEB4CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBDE1EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x104CCF03: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 20: /dev/nvidia-uvm ==692233== at 0x858D7A4: open (open64.c:41) ==692233== by 0x12836F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1281A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x127648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0xB8D6023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0xB8D6FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0x104DE46A: ??? ==692233== by 0xBF27F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBF03B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBEB4CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBDE1EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x104CCF03: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 19: /dev/nvidiactl ==692233== at 0x858D7A4: open (open64.c:41) ==692233== by 0x129CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x129D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x1281A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0x127648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==692233== by 0xB8D6023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0xB8D6FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==692233== by 0x104DE46A: ??? ==692233== by 0xBF27F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBF03B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==692233== by 0xBEB4CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBDE1EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x104CCF03: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 12: ==692233== at 0x858E26D: pipe (pipe.c:29) ==692233== by 0x104CC07D: ??? ==692233== by 0xBE164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692233== at 0x8592C0C: __open_nocancel (open64_nocancel.c:39) ==692233== by 0x8516BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692233== by 0x7C9E822: ??? ==692233== by 0x7C9E96F: ??? ==692233== by 0xBEBB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBEBB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBE71922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692233== by 0xBE162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692233== by 0x7DAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x7D48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692233== by 0x6A14D38: PetscInitialize (pinit.c:924) ==692233== by 0x68EB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692233== by 0x68EB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692233== by 0x12B976: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692233== by 0x126B9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692233== by 0x1294EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692233== by 0x12938C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692233== by 0x129A23: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692233== by 0x124F75: main (TestAbstractFunctionalCalculator.cpp:19) ==692233== ==692233== Open file descriptor 116: ==692233== ==692233== ==692233== Open file descriptor 113: ==692233== ==692233== ==692233== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractFunctionalCalculator_valgrind.txt ==692233== ==692233== ==692233== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692233== ==692233== ==692233== ==692233== HEAP SUMMARY: ==692233== in use at exit: 1,875,682 bytes in 11,738 blocks ==692233== total heap usage: 98,485 allocs, 86,747 frees, 1,535,198,663 bytes allocated ==692233== ==692233== LEAK SUMMARY: ==692233== definitely lost: 0 bytes in 0 blocks ==692233== indirectly lost: 0 bytes in 0 blocks ==692233== possibly lost: 0 bytes in 0 blocks ==692233== still reachable: 24 bytes in 2 blocks ==692233== suppressed: 1,875,658 bytes in 11,736 blocks ==692233== Reachable blocks (those to which a pointer was found) are not shown. ==692233== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692233== ==692233== For lists of detected and suppressed errors, rerun with: -s ==692233== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 53 from 53)