==707286== Memcheck, a memory error detector ==707286== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==707286== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==707286== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptStatistics -malloc_debug -malloc_dump -memory_info ==707286== Parent PID: 691175 ==707286== ==707286== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints. ==707286== This could cause spurious value errors to appear. ==707286== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==707286== Warning: noted but unhandled ioctl 0x27 with no size/direction hints. ==707286== This could cause spurious value errors to appear. ==707286== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==707286== Warning: noted but unhandled ioctl 0x25 with no size/direction hints. ==707286== This could cause spurious value errors to appear. ==707286== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==707286== Warning: noted but unhandled ioctl 0x17 with no size/direction hints. ==707286== This could cause spurious value errors to appear. ==707286== See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper. ==707286== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess) ==707286== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess) ==707286== Warning: set address range perms: large range [0x1e71f000, 0x3e71e000) (noaccess) ==707286== ==707286== FILE DESCRIPTORS: 14 open (3 std) at exit. ==707286== Open file descriptor 23: /dev/nvidia0 ==707286== at 0x1270B7A4: open (open64.c:41) ==707286== by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D866B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D754026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D75D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x12FD5023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x12FD5FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x1B37A46A: ??? ==707286== by 0x165E5F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x165C1B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x16572CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1649FEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x1B368F03: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 22: /dev/nvidia0 ==707286== at 0x1270B7A4: open (open64.c:41) ==707286== by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D75407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D75D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x12FD5023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x12FD5FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x1B37A46A: ??? ==707286== by 0x165E5F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x165C1B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x16572CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1649FEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x1B368F03: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 21: /dev/nvidia0 ==707286== at 0x1270B7A4: open (open64.c:41) ==707286== by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D75DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x12FD5023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x12FD5FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x1B37A46A: ??? ==707286== by 0x165E5F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x165C1B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x16572CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1649FEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x1B368F03: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 20: /dev/nvidia-uvm ==707286== at 0x1270B7A4: open (open64.c:41) ==707286== by 0x1D636F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D61A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x12FD5023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x12FD5FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x1B37A46A: ??? ==707286== by 0x165E5F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x165C1B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x16572CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1649FEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x1B368F03: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 19: /dev/nvidiactl ==707286== at 0x1270B7A4: open (open64.c:41) ==707286== by 0x1D7CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D7D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D61A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02) ==707286== by 0x12FD5023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x12FD5FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0) ==707286== by 0x1B37A46A: ??? ==707286== by 0x165E5F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x165C1B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==707286== by 0x16572CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1649FEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x1B368F03: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 12: ==707286== at 0x1270C26D: pipe (pipe.c:29) ==707286== by 0x1B36807D: ??? ==707286== by 0x164D44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 8: /dev/shm/open_mpi.0000 ==707286== at 0x12710C0C: __open_nocancel (open64_nocancel.c:39) ==707286== by 0x12694BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==707286== by 0x10A5C822: ??? ==707286== by 0x10A5C96F: ??? ==707286== by 0x165796DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x16579938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x1652F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707286== by 0x164D42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707286== by 0x11F2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x11EC6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707286== by 0x10BBDD38: PetscInitialize (pinit.c:924) ==707286== by 0x10A272DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707286== by 0x10A2732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707286== by 0x1BB797: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707286== by 0x1B35DF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707286== by 0x1B6DC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707286== by 0x1B6CBD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707286== by 0x1B72D1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707286== by 0x1B1DD5: main (TestCryptStatistics.cpp:18) ==707286== ==707286== Open file descriptor 116: ==707286== ==707286== ==707286== Open file descriptor 113: ==707286== ==707286== ==707286== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptStatistics_valgrind.txt ==707286== ==707286== ==707286== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==707286== ==707286== ==707286== ==707286== HEAP SUMMARY: ==707286== in use at exit: 1,875,805 bytes in 11,734 blocks ==707286== total heap usage: 1,807,873 allocs, 1,796,139 frees, 1,638,660,465 bytes allocated ==707286== ==707286== LEAK SUMMARY: ==707286== definitely lost: 0 bytes in 0 blocks ==707286== indirectly lost: 0 bytes in 0 blocks ==707286== possibly lost: 0 bytes in 0 blocks ==707286== still reachable: 24 bytes in 2 blocks ==707286== suppressed: 1,875,781 bytes in 11,732 blocks ==707286== Reachable blocks (those to which a pointer was found) are not shown. ==707286== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==707286== ==707286== For lists of detected and suppressed errors, rerun with: -s ==707286== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 50 from 50)