==706949== Memcheck, a memory error detector
==706949== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==706949== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==706949== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info
==706949== Parent PID: 691175
==706949== 
==706949== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==706949==    This could cause spurious value errors to appear.
==706949==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==706949== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==706949==    This could cause spurious value errors to appear.
==706949==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==706949== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==706949==    This could cause spurious value errors to appear.
==706949==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==706949== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==706949==    This could cause spurious value errors to appear.
==706949==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==706949== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==706949== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==706949== Warning: set address range perms: large range [0x1e71f000, 0x3e71e000) (noaccess)
==706949== 
==706949== FILE DESCRIPTORS: 14 open (3 std) at exit.
==706949== Open file descriptor 23: /dev/nvidia0
==706949==    at 0x1095F7A4: open (open64.c:41)
==706949==    by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D866B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D754026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D75D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x14F7E023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x14F7EFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x1B37846A: ???
==706949==    by 0x155D1F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x155ADB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x1555ECB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1548BEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x1B366F03: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 22: /dev/nvidia0
==706949==    at 0x1095F7A4: open (open64.c:41)
==706949==    by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D75407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D75D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x14F7E023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x14F7EFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x1B37846A: ???
==706949==    by 0x155D1F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x155ADB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x1555ECB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1548BEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x1B366F03: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 21: /dev/nvidia0
==706949==    at 0x1095F7A4: open (open64.c:41)
==706949==    by 0x1D7CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D75DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D85FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D61A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x14F7E023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x14F7EFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x1B37846A: ???
==706949==    by 0x155D1F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x155ADB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x1555ECB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1548BEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x1B366F03: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 20: /dev/nvidia-uvm
==706949==    at 0x1095F7A4: open (open64.c:41)
==706949==    by 0x1D636F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D61A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x14F7E023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x14F7EFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x1B37846A: ???
==706949==    by 0x155D1F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x155ADB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x1555ECB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1548BEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x1B366F03: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 19: /dev/nvidiactl
==706949==    at 0x1095F7A4: open (open64.c:41)
==706949==    by 0x1D7CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D7D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D61A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x1D5648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==706949==    by 0x14F7E023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x14F7EFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==706949==    by 0x1B37846A: ???
==706949==    by 0x155D1F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x155ADB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==706949==    by 0x1555ECB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1548BEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x1B366F03: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 12:
==706949==    at 0x1096026D: pipe (pipe.c:29)
==706949==    by 0x1B36607D: ???
==706949==    by 0x154C04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 8: /dev/shm/open_mpi.0000
==706949==    at 0x10964C0C: __open_nocancel (open64_nocancel.c:39)
==706949==    by 0x108E8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==706949==    by 0xED97822: ???
==706949==    by 0xED9796F: ???
==706949==    by 0x155656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x15565938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x1551B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==706949==    by 0x154C02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==706949==    by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==706949==    by 0xEEF8D38: PetscInitialize (pinit.c:924)
==706949==    by 0xED622DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==706949==    by 0xED6232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==706949==    by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==706949==    by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==706949==    by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==706949==    by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==706949==    by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==706949==    by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19)
==706949== 
==706949== Open file descriptor 116:
==706949==    <inherited from parent>
==706949== 
==706949== Open file descriptor 113:
==706949==    <inherited from parent>
==706949== 
==706949== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt
==706949==    <inherited from parent>
==706949== 
==706949== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==706949==    <inherited from parent>
==706949== 
==706949== 
==706949== HEAP SUMMARY:
==706949==     in use at exit: 1,876,021 bytes in 11,740 blocks
==706949==   total heap usage: 762,302 allocs, 750,562 frees, 1,567,237,186 bytes allocated
==706949== 
==706949== LEAK SUMMARY:
==706949==    definitely lost: 0 bytes in 0 blocks
==706949==    indirectly lost: 0 bytes in 0 blocks
==706949==      possibly lost: 0 bytes in 0 blocks
==706949==    still reachable: 120 bytes in 4 blocks
==706949==         suppressed: 1,875,901 bytes in 11,736 blocks
==706949== Reachable blocks (those to which a pointer was found) are not shown.
==706949== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==706949== 
==706949== For lists of detected and suppressed errors, rerun with: -s
==706949== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 53 from 53)