==52039== Memcheck, a memory error detector ==52039== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==52039== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==52039== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==52039== Parent PID: 50368 ==52039== ==52039== ==52039== FILE DESCRIPTORS: 9 open (3 std) at exit. ==52039== Open file descriptor 12: ==52039== at 0xF93426D: pipe (pipe.c:29) ==52039== by 0x196B007D: ??? ==52039== by 0x14CC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52039== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52039== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52039== by 0x10220D38: PetscInitialize (pinit.c:924) ==52039== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52039== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52039== by 0x1550EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52039== by 0x14DBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52039== by 0x150A32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52039== by 0x1508D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52039== by 0x150F69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52039== by 0x14C005: main (TestCellPopulationBoundaryConditions.cpp:19) ==52039== ==52039== Open file descriptor 8: /dev/shm/open_mpi.0000 ==52039== at 0xF938C0C: __open_nocancel (open64_nocancel.c:39) ==52039== by 0xF8BCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==52039== by 0xF13C822: ??? ==52039== by 0xF13C96F: ??? ==52039== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52039== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52039== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52039== by 0x14CC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52039== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52039== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52039== by 0x10220D38: PetscInitialize (pinit.c:924) ==52039== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52039== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52039== by 0x1550EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52039== by 0x14DBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52039== by 0x150A32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52039== by 0x1508D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52039== by 0x150F69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52039== by 0x14C005: main (TestCellPopulationBoundaryConditions.cpp:19) ==52039== ==52039== Open file descriptor 115: ==52039== ==52039== ==52039== Open file descriptor 112: ==52039== ==52039== ==52039== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==52039== ==52039== ==52039== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==52039== ==52039== ==52039== ==52039== HEAP SUMMARY: ==52039== in use at exit: 835,623 bytes in 11,677 blocks ==52039== total heap usage: 78,657 allocs, 66,980 frees, 1,544,224,380 bytes allocated ==52039== ==52039== LEAK SUMMARY: ==52039== definitely lost: 0 bytes in 0 blocks ==52039== indirectly lost: 0 bytes in 0 blocks ==52039== possibly lost: 0 bytes in 0 blocks ==52039== still reachable: 56 bytes in 3 blocks ==52039== suppressed: 835,567 bytes in 11,674 blocks ==52039== Reachable blocks (those to which a pointer was found) are not shown. ==52039== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==52039== ==52039== For lists of detected and suppressed errors, rerun with: -s ==52039== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)