==50609== Memcheck, a memory error detector ==50609== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==50609== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==50609== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==50609== Parent PID: 50368 ==50609== ==50609== ==50609== FILE DESCRIPTORS: 9 open (3 std) at exit. ==50609== Open file descriptor 12: ==50609== at 0x61E726D: pipe (pipe.c:29) ==50609== by 0xAF1607D: ??? ==50609== by 0x8A394CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50609== by 0x5E36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50609== by 0x5DCFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50609== by 0x4A96D38: PetscInitialize (pinit.c:924) ==50609== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50609== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50609== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==50609== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50609== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50609== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50609== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50609== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==50609== ==50609== Open file descriptor 8: /dev/shm/open_mpi.0000 ==50609== at 0x61EBC0C: __open_nocancel (open64_nocancel.c:39) ==50609== by 0x616FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==50609== by 0x5D26822: ??? ==50609== by 0x5D2696F: ??? ==50609== by 0x8AE06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50609== by 0x8AE0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50609== by 0x8A96922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50609== by 0x8A392DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50609== by 0x5E36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50609== by 0x5DCFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50609== by 0x4A96D38: PetscInitialize (pinit.c:924) ==50609== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50609== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50609== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==50609== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50609== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50609== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50609== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50609== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==50609== ==50609== Open file descriptor 115: ==50609== ==50609== ==50609== Open file descriptor 112: ==50609== ==50609== ==50609== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==50609== ==50609== ==50609== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==50609== ==50609== ==50609== ==50609== HEAP SUMMARY: ==50609== in use at exit: 835,143 bytes in 11,676 blocks ==50609== total heap usage: 70,292 allocs, 58,616 frees, 1,542,973,970 bytes allocated ==50609== ==50609== LEAK SUMMARY: ==50609== definitely lost: 0 bytes in 0 blocks ==50609== indirectly lost: 0 bytes in 0 blocks ==50609== possibly lost: 0 bytes in 0 blocks ==50609== still reachable: 24 bytes in 2 blocks ==50609== suppressed: 835,119 bytes in 11,674 blocks ==50609== Reachable blocks (those to which a pointer was found) are not shown. ==50609== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==50609== ==50609== For lists of detected and suppressed errors, rerun with: -s ==50609== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)