==52158== Memcheck, a memory error detector ==52158== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==52158== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==52158== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==52158== Parent PID: 50368 ==52158== ==52158== ==52158== FILE DESCRIPTORS: 9 open (3 std) at exit. ==52158== Open file descriptor 12: ==52158== at 0x10CC026D: pipe (pipe.c:29) ==52158== by 0x196B007D: ??? ==52158== by 0x14C224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52158== by 0x105C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52158== by 0x10561D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52158== by 0xF22AD38: PetscInitialize (pinit.c:924) ==52158== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52158== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52158== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==52158== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52158== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52158== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52158== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52158== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==52158== ==52158== Open file descriptor 8: /dev/shm/open_mpi.0000 ==52158== at 0x10CC4C0C: __open_nocancel (open64_nocancel.c:39) ==52158== by 0x10C48BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==52158== by 0x104BA822: ??? ==52158== by 0x104BA96F: ??? ==52158== by 0x14CC76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52158== by 0x14CC7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52158== by 0x14C7D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52158== by 0x14C222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52158== by 0x105C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52158== by 0x10561D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52158== by 0xF22AD38: PetscInitialize (pinit.c:924) ==52158== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52158== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52158== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==52158== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52158== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52158== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52158== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52158== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==52158== ==52158== Open file descriptor 115: ==52158== ==52158== ==52158== Open file descriptor 112: ==52158== ==52158== ==52158== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==52158== ==52158== ==52158== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==52158== ==52158== ==52158== ==52158== HEAP SUMMARY: ==52158== in use at exit: 835,623 bytes in 11,677 blocks ==52158== total heap usage: 69,166 allocs, 57,489 frees, 1,541,053,819 bytes allocated ==52158== ==52158== LEAK SUMMARY: ==52158== definitely lost: 0 bytes in 0 blocks ==52158== indirectly lost: 0 bytes in 0 blocks ==52158== possibly lost: 0 bytes in 0 blocks ==52158== still reachable: 56 bytes in 3 blocks ==52158== suppressed: 835,567 bytes in 11,674 blocks ==52158== Reachable blocks (those to which a pointer was found) are not shown. ==52158== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==52158== ==52158== For lists of detected and suppressed errors, rerun with: -s ==52158== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)