==52224== Memcheck, a memory error detector ==52224== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==52224== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==52224== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==52224== Parent PID: 50368 ==52224== ==52224== ==52224== FILE DESCRIPTORS: 9 open (3 std) at exit. ==52224== Open file descriptor 12: ==52224== at 0xF93426D: pipe (pipe.c:29) ==52224== by 0x196B007D: ??? ==52224== by 0x14CC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52224== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52224== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52224== by 0x10220D38: PetscInitialize (pinit.c:924) ==52224== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52224== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52224== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52224== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52224== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52224== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52224== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52224== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==52224== ==52224== Open file descriptor 8: /dev/shm/open_mpi.0000 ==52224== at 0xF938C0C: __open_nocancel (open64_nocancel.c:39) ==52224== by 0xF8BCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==52224== by 0xF13C822: ??? ==52224== by 0xF13C96F: ??? ==52224== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52224== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52224== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52224== by 0x14CC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52224== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52224== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52224== by 0x10220D38: PetscInitialize (pinit.c:924) ==52224== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52224== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52224== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52224== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52224== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52224== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52224== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52224== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==52224== ==52224== Open file descriptor 115: ==52224== ==52224== ==52224== Open file descriptor 112: ==52224== ==52224== ==52224== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==52224== ==52224== ==52224== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==52224== ==52224== ==52224== ==52224== HEAP SUMMARY: ==52224== in use at exit: 835,623 bytes in 11,677 blocks ==52224== total heap usage: 111,954 allocs, 100,277 frees, 1,547,954,774 bytes allocated ==52224== ==52224== LEAK SUMMARY: ==52224== definitely lost: 0 bytes in 0 blocks ==52224== indirectly lost: 0 bytes in 0 blocks ==52224== possibly lost: 0 bytes in 0 blocks ==52224== still reachable: 56 bytes in 3 blocks ==52224== suppressed: 835,567 bytes in 11,674 blocks ==52224== Reachable blocks (those to which a pointer was found) are not shown. ==52224== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==52224== ==52224== For lists of detected and suppressed errors, rerun with: -s ==52224== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)