==52463== Memcheck, a memory error detector ==52463== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==52463== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==52463== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==52463== Parent PID: 50368 ==52463== ==52463== ==52463== FILE DESCRIPTORS: 9 open (3 std) at exit. ==52463== Open file descriptor 12: ==52463== at 0x10DE926D: pipe (pipe.c:29) ==52463== by 0x196B007D: ??? ==52463== by 0x14C224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52463== by 0x1060A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52463== by 0x105A3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52463== by 0xF29AD38: PetscInitialize (pinit.c:924) ==52463== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52463== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52463== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==52463== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52463== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52463== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52463== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52463== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==52463== ==52463== Open file descriptor 8: /dev/shm/open_mpi.0000 ==52463== at 0x10DEDC0C: __open_nocancel (open64_nocancel.c:39) ==52463== by 0x10D71BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==52463== by 0xF13C822: ??? ==52463== by 0xF13C96F: ??? ==52463== by 0x14CC76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52463== by 0x14CC7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52463== by 0x14C7D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52463== by 0x14C222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52463== by 0x1060A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52463== by 0x105A3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52463== by 0xF29AD38: PetscInitialize (pinit.c:924) ==52463== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52463== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52463== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==52463== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52463== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52463== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52463== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52463== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==52463== ==52463== Open file descriptor 115: ==52463== ==52463== ==52463== Open file descriptor 112: ==52463== ==52463== ==52463== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==52463== ==52463== ==52463== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==52463== ==52463== ==52463== ==52463== HEAP SUMMARY: ==52463== in use at exit: 835,623 bytes in 11,677 blocks ==52463== total heap usage: 863,197 allocs, 851,520 frees, 1,705,811,871 bytes allocated ==52463== ==52463== LEAK SUMMARY: ==52463== definitely lost: 0 bytes in 0 blocks ==52463== indirectly lost: 0 bytes in 0 blocks ==52463== possibly lost: 0 bytes in 0 blocks ==52463== still reachable: 56 bytes in 3 blocks ==52463== suppressed: 835,567 bytes in 11,674 blocks ==52463== Reachable blocks (those to which a pointer was found) are not shown. ==52463== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==52463== ==52463== For lists of detected and suppressed errors, rerun with: -s ==52463== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)