==52461== Memcheck, a memory error detector ==52461== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==52461== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==52461== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==52461== Parent PID: 50368 ==52461== ==52461== ==52461== FILE DESCRIPTORS: 9 open (3 std) at exit. ==52461== Open file descriptor 12: ==52461== at 0xF93426D: pipe (pipe.c:29) ==52461== by 0x196B007D: ??? ==52461== by 0x14CC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52461== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52461== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52461== by 0x10220D38: PetscInitialize (pinit.c:924) ==52461== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52461== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52461== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52461== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52461== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52461== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52461== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52461== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==52461== ==52461== Open file descriptor 8: /dev/shm/open_mpi.0000 ==52461== at 0xF938C0C: __open_nocancel (open64_nocancel.c:39) ==52461== by 0xF8BCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==52461== by 0xF13C822: ??? ==52461== by 0xF13C96F: ??? ==52461== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52461== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52461== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==52461== by 0x14CC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==52461== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52461== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==52461== by 0x10220D38: PetscInitialize (pinit.c:924) ==52461== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==52461== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==52461== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==52461== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==52461== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==52461== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==52461== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==52461== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==52461== ==52461== Open file descriptor 115: ==52461== ==52461== ==52461== Open file descriptor 112: ==52461== ==52461== ==52461== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==52461== ==52461== ==52461== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==52461== ==52461== ==52461== ==52461== HEAP SUMMARY: ==52461== in use at exit: 835,560 bytes in 11,673 blocks ==52461== total heap usage: 12,858,251 allocs, 12,846,578 frees, 4,063,064,220 bytes allocated ==52461== ==52461== LEAK SUMMARY: ==52461== definitely lost: 0 bytes in 0 blocks ==52461== indirectly lost: 0 bytes in 0 blocks ==52461== possibly lost: 0 bytes in 0 blocks ==52461== still reachable: 56 bytes in 3 blocks ==52461== suppressed: 835,504 bytes in 11,670 blocks ==52461== Reachable blocks (those to which a pointer was found) are not shown. ==52461== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==52461== ==52461== For lists of detected and suppressed errors, rerun with: -s ==52461== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)