==55104== Memcheck, a memory error detector ==55104== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==55104== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==55104== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==55104== Parent PID: 50368 ==55104== ==55104== ==55104== FILE DESCRIPTORS: 9 open (3 std) at exit. ==55104== Open file descriptor 12: ==55104== at 0xFC8F26D: pipe (pipe.c:29) ==55104== by 0x196B007D: ??? ==55104== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==55104== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55104== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55104== by 0x10220D38: PetscInitialize (pinit.c:924) ==55104== by 0xF49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==55104== by 0xF49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==55104== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==55104== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==55104== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==55104== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==55104== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==55104== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==55104== ==55104== Open file descriptor 8: /dev/shm/open_mpi.0000 ==55104== at 0xFC93C0C: __open_nocancel (open64_nocancel.c:39) ==55104== by 0xFC17BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==55104== by 0xF4D9822: ??? ==55104== by 0xF4D996F: ??? ==55104== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55104== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55104== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55104== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==55104== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55104== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55104== by 0x10220D38: PetscInitialize (pinit.c:924) ==55104== by 0xF49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==55104== by 0xF49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==55104== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==55104== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==55104== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==55104== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==55104== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==55104== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==55104== ==55104== Open file descriptor 115: ==55104== ==55104== ==55104== Open file descriptor 112: ==55104== ==55104== ==55104== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==55104== ==55104== ==55104== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==55104== ==55104== ==55104== ==55104== HEAP SUMMARY: ==55104== in use at exit: 835,560 bytes in 11,673 blocks ==55104== total heap usage: 2,365,181 allocs, 2,353,508 frees, 1,978,092,840 bytes allocated ==55104== ==55104== LEAK SUMMARY: ==55104== definitely lost: 0 bytes in 0 blocks ==55104== indirectly lost: 0 bytes in 0 blocks ==55104== possibly lost: 0 bytes in 0 blocks ==55104== still reachable: 56 bytes in 3 blocks ==55104== suppressed: 835,504 bytes in 11,670 blocks ==55104== Reachable blocks (those to which a pointer was found) are not shown. ==55104== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==55104== ==55104== For lists of detected and suppressed errors, rerun with: -s ==55104== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)