==59340== Memcheck, a memory error detector ==59340== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==59340== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==59340== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==59340== Parent PID: 50368 ==59340== ==59340== ==59340== FILE DESCRIPTORS: 9 open (3 std) at exit. ==59340== Open file descriptor 12: ==59340== at 0xF93426D: pipe (pipe.c:29) ==59340== by 0x196B007D: ??? ==59340== by 0x14CC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==59340== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==59340== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==59340== by 0x10220D38: PetscInitialize (pinit.c:924) ==59340== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==59340== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==59340== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==59340== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==59340== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==59340== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==59340== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==59340== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==59340== ==59340== Open file descriptor 8: /dev/shm/open_mpi.0000 ==59340== at 0xF938C0C: __open_nocancel (open64_nocancel.c:39) ==59340== by 0xF8BCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==59340== by 0xF13C822: ??? ==59340== by 0xF13C96F: ??? ==59340== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==59340== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==59340== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==59340== by 0x14CC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==59340== by 0x11590418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==59340== by 0x11529D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==59340== by 0x10220D38: PetscInitialize (pinit.c:924) ==59340== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==59340== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==59340== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==59340== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==59340== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==59340== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==59340== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==59340== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==59340== ==59340== Open file descriptor 115: ==59340== ==59340== ==59340== Open file descriptor 112: ==59340== ==59340== ==59340== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==59340== ==59340== ==59340== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==59340== ==59340== ==59340== ==59340== HEAP SUMMARY: ==59340== in use at exit: 835,576 bytes in 11,674 blocks ==59340== total heap usage: 11,690,517 allocs, 11,678,843 frees, 2,410,287,067 bytes allocated ==59340== ==59340== LEAK SUMMARY: ==59340== definitely lost: 0 bytes in 0 blocks ==59340== indirectly lost: 0 bytes in 0 blocks ==59340== possibly lost: 0 bytes in 0 blocks ==59340== still reachable: 72 bytes in 4 blocks ==59340== suppressed: 835,504 bytes in 11,670 blocks ==59340== Reachable blocks (those to which a pointer was found) are not shown. ==59340== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==59340== ==59340== For lists of detected and suppressed errors, rerun with: -s ==59340== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)