==66140== Memcheck, a memory error detector ==66140== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==66140== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==66140== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==66140== Parent PID: 50368 ==66140== ==66140== ==66140== FILE DESCRIPTORS: 9 open (3 std) at exit. ==66140== Open file descriptor 12: ==66140== at 0xFBA626D: pipe (pipe.c:29) ==66140== by 0x196B007D: ??? ==66140== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==66140== by 0x114A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66140== by 0x11442D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66140== by 0x10137D38: PetscInitialize (pinit.c:924) ==66140== by 0xF49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==66140== by 0xF49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==66140== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==66140== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==66140== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==66140== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==66140== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==66140== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==66140== ==66140== Open file descriptor 8: /dev/shm/open_mpi.0000 ==66140== at 0xFBAAC0C: __open_nocancel (open64_nocancel.c:39) ==66140== by 0xFB2EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==66140== by 0xF4D9822: ??? ==66140== by 0xF4D996F: ??? ==66140== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66140== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66140== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66140== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==66140== by 0x114A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66140== by 0x11442D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66140== by 0x10137D38: PetscInitialize (pinit.c:924) ==66140== by 0xF49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==66140== by 0xF49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==66140== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==66140== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==66140== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==66140== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==66140== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==66140== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==66140== ==66140== Open file descriptor 115: ==66140== ==66140== ==66140== Open file descriptor 112: ==66140== ==66140== ==66140== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==66140== ==66140== ==66140== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==66140== ==66140== ==66140== ==66140== HEAP SUMMARY: ==66140== in use at exit: 835,560 bytes in 11,673 blocks ==66140== total heap usage: 2,092,556 allocs, 2,080,883 frees, 1,876,618,370 bytes allocated ==66140== ==66140== LEAK SUMMARY: ==66140== definitely lost: 0 bytes in 0 blocks ==66140== indirectly lost: 0 bytes in 0 blocks ==66140== possibly lost: 0 bytes in 0 blocks ==66140== still reachable: 56 bytes in 3 blocks ==66140== suppressed: 835,504 bytes in 11,670 blocks ==66140== Reachable blocks (those to which a pointer was found) are not shown. ==66140== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==66140== ==66140== For lists of detected and suppressed errors, rerun with: -s ==66140== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)