==66154== Memcheck, a memory error detector ==66154== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==66154== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==66154== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==66154== Parent PID: 50368 ==66154== ==66154== ==66154== FILE DESCRIPTORS: 9 open (3 std) at exit. ==66154== Open file descriptor 12: ==66154== at 0x10DA726D: pipe (pipe.c:29) ==66154== by 0x196B007D: ??? ==66154== by 0x14C224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==66154== by 0x105C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66154== by 0x10561D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66154== by 0xF22AD38: PetscInitialize (pinit.c:924) ==66154== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==66154== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==66154== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==66154== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==66154== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==66154== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==66154== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==66154== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==66154== ==66154== Open file descriptor 8: /dev/shm/open_mpi.0000 ==66154== at 0x10DABC0C: __open_nocancel (open64_nocancel.c:39) ==66154== by 0x10D2FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==66154== by 0x104BA822: ??? ==66154== by 0x104BA96F: ??? ==66154== by 0x14CC76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66154== by 0x14CC7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66154== by 0x14C7D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==66154== by 0x14C222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==66154== by 0x105C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66154== by 0x10561D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==66154== by 0xF22AD38: PetscInitialize (pinit.c:924) ==66154== by 0xF1012DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==66154== by 0xF10132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==66154== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==66154== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==66154== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==66154== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==66154== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==66154== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==66154== ==66154== Open file descriptor 115: ==66154== ==66154== ==66154== Open file descriptor 112: ==66154== ==66154== ==66154== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==66154== ==66154== ==66154== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==66154== ==66154== ==66154== ==66154== HEAP SUMMARY: ==66154== in use at exit: 835,560 bytes in 11,673 blocks ==66154== total heap usage: 1,407,730 allocs, 1,396,057 frees, 1,600,284,510 bytes allocated ==66154== ==66154== LEAK SUMMARY: ==66154== definitely lost: 0 bytes in 0 blocks ==66154== indirectly lost: 0 bytes in 0 blocks ==66154== possibly lost: 0 bytes in 0 blocks ==66154== still reachable: 56 bytes in 3 blocks ==66154== suppressed: 835,504 bytes in 11,670 blocks ==66154== Reachable blocks (those to which a pointer was found) are not shown. ==66154== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==66154== ==66154== For lists of detected and suppressed errors, rerun with: -s ==66154== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)