==414764== Memcheck, a memory error detector ==414764== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414764== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414764== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==414764== Parent PID: 413147 ==414764== ==414764== ==414764== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414764== Open file descriptor 12: ==414764== at 0xD89B26D: pipe (pipe.c:29) ==414764== by 0x1977407D: ??? ==414764== by 0x14D1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414764== by 0x11154418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414764== by 0x110EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414764== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414764== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414764== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414764== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414764== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414764== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414764== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414764== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414764== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==414764== ==414764== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414764== at 0xD89FC0C: __open_nocancel (open64_nocancel.c:39) ==414764== by 0xD823BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414764== by 0xD4D4822: ??? ==414764== by 0xD4D496F: ??? ==414764== by 0x14DC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414764== by 0x14DC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414764== by 0x14D79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414764== by 0x14D1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414764== by 0x11154418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414764== by 0x110EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414764== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414764== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414764== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414764== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414764== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414764== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414764== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414764== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414764== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==414764== ==414764== Open file descriptor 116: ==414764== ==414764== ==414764== Open file descriptor 113: ==414764== ==414764== ==414764== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==414764== ==414764== ==414764== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414764== ==414764== ==414764== ==414764== HEAP SUMMARY: ==414764== in use at exit: 858,019 bytes in 12,113 blocks ==414764== total heap usage: 64,378 allocs, 52,265 frees, 1,543,651,120 bytes allocated ==414764== ==414764== LEAK SUMMARY: ==414764== definitely lost: 0 bytes in 0 blocks ==414764== indirectly lost: 0 bytes in 0 blocks ==414764== possibly lost: 0 bytes in 0 blocks ==414764== still reachable: 56 bytes in 3 blocks ==414764== suppressed: 857,963 bytes in 12,110 blocks ==414764== Reachable blocks (those to which a pointer was found) are not shown. ==414764== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414764== ==414764== For lists of detected and suppressed errors, rerun with: -s ==414764== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)