==414422== Memcheck, a memory error detector ==414422== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414422== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414422== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==414422== Parent PID: 413147 ==414422== ==414422== ==414422== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414422== Open file descriptor 12: ==414422== at 0xED5026D: pipe (pipe.c:29) ==414422== by 0x1977607D: ??? ==414422== by 0x138BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414422== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414422== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414422== by 0xD62FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414422== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414422== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414422== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414422== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414422== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414422== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414422== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414422== by 0x125225: main (TestCellMutationStates.cpp:19) ==414422== ==414422== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414422== at 0xED54C0C: __open_nocancel (open64_nocancel.c:39) ==414422== by 0xECD8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414422== by 0xD4D4822: ??? ==414422== by 0xD4D496F: ??? ==414422== by 0x139606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414422== by 0x13960938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414422== by 0x13916922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414422== by 0x138BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414422== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414422== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414422== by 0xD62FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414422== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414422== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414422== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414422== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414422== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414422== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414422== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414422== by 0x125225: main (TestCellMutationStates.cpp:19) ==414422== ==414422== Open file descriptor 116: ==414422== ==414422== ==414422== Open file descriptor 113: ==414422== ==414422== ==414422== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==414422== ==414422== ==414422== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414422== ==414422== ==414422== ==414422== HEAP SUMMARY: ==414422== in use at exit: 858,019 bytes in 12,113 blocks ==414422== total heap usage: 61,802 allocs, 49,689 frees, 1,543,391,654 bytes allocated ==414422== ==414422== LEAK SUMMARY: ==414422== definitely lost: 0 bytes in 0 blocks ==414422== indirectly lost: 0 bytes in 0 blocks ==414422== possibly lost: 0 bytes in 0 blocks ==414422== still reachable: 56 bytes in 3 blocks ==414422== suppressed: 857,963 bytes in 12,110 blocks ==414422== Reachable blocks (those to which a pointer was found) are not shown. ==414422== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414422== ==414422== For lists of detected and suppressed errors, rerun with: -s ==414422== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)