==414375== Memcheck, a memory error detector ==414375== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414375== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414375== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==414375== Parent PID: 413147 ==414375== ==414375== ==414375== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414375== Open file descriptor 12: ==414375== at 0xED0E26D: pipe (pipe.c:29) ==414375== by 0x1977607D: ??? ==414375== by 0x138BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414375== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414375== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414375== by 0xD5CAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414375== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414375== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414375== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414375== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414375== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414375== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414375== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414375== by 0x1222F5: main (TestCell.cpp:19) ==414375== ==414375== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414375== at 0xED12C0C: __open_nocancel (open64_nocancel.c:39) ==414375== by 0xEC96BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414375== by 0xE854822: ??? ==414375== by 0xE85496F: ??? ==414375== by 0x139606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414375== by 0x13960938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414375== by 0x13916922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414375== by 0x138BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414375== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414375== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414375== by 0xD5CAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414375== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414375== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414375== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414375== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414375== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414375== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414375== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414375== by 0x1222F5: main (TestCell.cpp:19) ==414375== ==414375== Open file descriptor 116: ==414375== ==414375== ==414375== Open file descriptor 113: ==414375== ==414375== ==414375== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==414375== ==414375== ==414375== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414375== ==414375== ==414375== ==414375== HEAP SUMMARY: ==414375== in use at exit: 858,087 bytes in 12,110 blocks ==414375== total heap usage: 5,191,997 allocs, 5,179,887 frees, 2,023,649,401 bytes allocated ==414375== ==414375== LEAK SUMMARY: ==414375== definitely lost: 0 bytes in 0 blocks ==414375== indirectly lost: 0 bytes in 0 blocks ==414375== possibly lost: 0 bytes in 0 blocks ==414375== still reachable: 184 bytes in 4 blocks ==414375== suppressed: 857,903 bytes in 12,106 blocks ==414375== Reachable blocks (those to which a pointer was found) are not shown. ==414375== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414375== ==414375== For lists of detected and suppressed errors, rerun with: -s ==414375== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)