==414820== Memcheck, a memory error detector ==414820== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414820== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414820== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==414820== Parent PID: 413147 ==414820== ==414820== ==414820== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414820== Open file descriptor 12: ==414820== at 0xF4B526D: pipe (pipe.c:29) ==414820== by 0x1977607D: ??? ==414820== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414820== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414820== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414820== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414820== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414820== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414820== by 0x11DCAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414820== by 0x119453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414820== by 0x11B7C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414820== by 0x11B6C3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414820== by 0x11BCD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414820== by 0x117C55: main (TestCellwiseDataGradient.cpp:18) ==414820== ==414820== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414820== at 0xF4B9C0C: __open_nocancel (open64_nocancel.c:39) ==414820== by 0xF43DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414820== by 0xF132822: ??? ==414820== by 0xF13296F: ??? ==414820== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414820== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414820== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414820== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414820== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414820== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414820== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414820== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414820== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414820== by 0x11DCAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414820== by 0x119453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414820== by 0x11B7C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414820== by 0x11B6C3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414820== by 0x11BCD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414820== by 0x117C55: main (TestCellwiseDataGradient.cpp:18) ==414820== ==414820== Open file descriptor 116: ==414820== ==414820== ==414820== Open file descriptor 113: ==414820== ==414820== ==414820== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==414820== ==414820== ==414820== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414820== ==414820== ==414820== ==414820== HEAP SUMMARY: ==414820== in use at exit: 858,019 bytes in 12,113 blocks ==414820== total heap usage: 427,495 allocs, 415,382 frees, 1,558,125,666 bytes allocated ==414820== ==414820== LEAK SUMMARY: ==414820== definitely lost: 0 bytes in 0 blocks ==414820== indirectly lost: 0 bytes in 0 blocks ==414820== possibly lost: 0 bytes in 0 blocks ==414820== still reachable: 56 bytes in 3 blocks ==414820== suppressed: 857,963 bytes in 12,110 blocks ==414820== Reachable blocks (those to which a pointer was found) are not shown. ==414820== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414820== ==414820== For lists of detected and suppressed errors, rerun with: -s ==414820== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)