==421913== Memcheck, a memory error detector ==421913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==421913== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==421913== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==421913== Parent PID: 413147 ==421913== ==421913== ==421913== FILE DESCRIPTORS: 9 open (3 std) at exit. ==421913== Open file descriptor 12: ==421913== at 0x10CD826D: pipe (pipe.c:29) ==421913== by 0x1977407D: ??? ==421913== by 0x14D114CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==421913== by 0x1083E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==421913== by 0x107D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==421913== by 0xF4CED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==421913== by 0xF3402DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==421913== by 0xF34032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==421913== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==421913== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==421913== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==421913== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==421913== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==421913== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==421913== ==421913== Open file descriptor 8: /dev/shm/open_mpi.0000 ==421913== at 0x10CDCC0C: __open_nocancel (open64_nocancel.c:39) ==421913== by 0x10C60BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==421913== by 0xF375822: ??? ==421913== by 0xF37596F: ??? ==421913== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==421913== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==421913== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==421913== by 0x14D112DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==421913== by 0x1083E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==421913== by 0x107D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==421913== by 0xF4CED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==421913== by 0xF3402DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==421913== by 0xF34032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==421913== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==421913== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==421913== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==421913== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==421913== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==421913== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==421913== ==421913== Open file descriptor 116: ==421913== ==421913== ==421913== Open file descriptor 113: ==421913== ==421913== ==421913== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==421913== ==421913== ==421913== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==421913== ==421913== ==421913== ==421913== HEAP SUMMARY: ==421913== in use at exit: 857,959 bytes in 12,109 blocks ==421913== total heap usage: 3,792,373 allocs, 3,780,264 frees, 1,712,078,473 bytes allocated ==421913== ==421913== LEAK SUMMARY: ==421913== definitely lost: 0 bytes in 0 blocks ==421913== indirectly lost: 0 bytes in 0 blocks ==421913== possibly lost: 0 bytes in 0 blocks ==421913== still reachable: 56 bytes in 3 blocks ==421913== suppressed: 857,903 bytes in 12,106 blocks ==421913== Reachable blocks (those to which a pointer was found) are not shown. ==421913== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==421913== ==421913== For lists of detected and suppressed errors, rerun with: -s ==421913== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)