==422352== Memcheck, a memory error detector ==422352== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==422352== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==422352== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==422352== Parent PID: 413147 ==422352== ==422352== ==422352== FILE DESCRIPTORS: 9 open (3 std) at exit. ==422352== Open file descriptor 12: ==422352== at 0x10E9F26D: pipe (pipe.c:29) ==422352== by 0x1B43707D: ??? ==422352== by 0x165D34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422352== by 0x12AFA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422352== by 0x12A93D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422352== by 0x1178AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422352== by 0x109BC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422352== by 0x109BC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422352== by 0x23B2C4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422352== by 0x2317F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422352== by 0x235EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422352== by 0x235D66: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422352== by 0x2363FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422352== by 0x22FC15: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==422352== ==422352== Open file descriptor 8: /dev/shm/open_mpi.0000 ==422352== at 0x10EA3C0C: __open_nocancel (open64_nocancel.c:39) ==422352== by 0x10E27BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==422352== by 0x109F1822: ??? ==422352== by 0x109F196F: ??? ==422352== by 0x166786DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422352== by 0x16678938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422352== by 0x1662E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422352== by 0x165D32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422352== by 0x12AFA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422352== by 0x12A93D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422352== by 0x1178AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422352== by 0x109BC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422352== by 0x109BC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422352== by 0x23B2C4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422352== by 0x2317F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422352== by 0x235EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422352== by 0x235D66: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422352== by 0x2363FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422352== by 0x22FC15: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==422352== ==422352== Open file descriptor 116: ==422352== ==422352== ==422352== Open file descriptor 113: ==422352== ==422352== ==422352== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==422352== ==422352== ==422352== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==422352== ==422352== ==422352== ==422352== HEAP SUMMARY: ==422352== in use at exit: 857,975 bytes in 12,109 blocks ==422352== total heap usage: 6,192,365 allocs, 6,180,256 frees, 2,256,615,149 bytes allocated ==422352== ==422352== LEAK SUMMARY: ==422352== definitely lost: 0 bytes in 0 blocks ==422352== indirectly lost: 0 bytes in 0 blocks ==422352== possibly lost: 0 bytes in 0 blocks ==422352== still reachable: 56 bytes in 3 blocks ==422352== suppressed: 857,919 bytes in 12,106 blocks ==422352== Reachable blocks (those to which a pointer was found) are not shown. ==422352== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==422352== ==422352== For lists of detected and suppressed errors, rerun with: -s ==422352== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)