==415022== Memcheck, a memory error detector ==415022== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==415022== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==415022== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==415022== Parent PID: 413147 ==415022== ==415022== ==415022== FILE DESCRIPTORS: 9 open (3 std) at exit. ==415022== Open file descriptor 12: ==415022== at 0xF59C26D: pipe (pipe.c:29) ==415022== by 0x1977607D: ??? ==415022== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==415022== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415022== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415022== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==415022== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==415022== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==415022== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==415022== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==415022== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==415022== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==415022== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==415022== by 0x133435: main (TestNumericalMethods.cpp:19) ==415022== ==415022== Open file descriptor 8: /dev/shm/open_mpi.0000 ==415022== at 0xF5A0C0C: __open_nocancel (open64_nocancel.c:39) ==415022== by 0xF524BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==415022== by 0xF132822: ??? ==415022== by 0xF13296F: ??? ==415022== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415022== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415022== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415022== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==415022== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415022== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415022== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==415022== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==415022== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==415022== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==415022== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==415022== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==415022== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==415022== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==415022== by 0x133435: main (TestNumericalMethods.cpp:19) ==415022== ==415022== Open file descriptor 116: ==415022== ==415022== ==415022== Open file descriptor 113: ==415022== ==415022== ==415022== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==415022== ==415022== ==415022== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==415022== ==415022== ==415022== ==415022== HEAP SUMMARY: ==415022== in use at exit: 858,019 bytes in 12,113 blocks ==415022== total heap usage: 77,828 allocs, 65,715 frees, 1,546,325,480 bytes allocated ==415022== ==415022== LEAK SUMMARY: ==415022== definitely lost: 0 bytes in 0 blocks ==415022== indirectly lost: 0 bytes in 0 blocks ==415022== possibly lost: 0 bytes in 0 blocks ==415022== still reachable: 56 bytes in 3 blocks ==415022== suppressed: 857,963 bytes in 12,110 blocks ==415022== Reachable blocks (those to which a pointer was found) are not shown. ==415022== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==415022== ==415022== For lists of detected and suppressed errors, rerun with: -s ==415022== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)