==415309== Memcheck, a memory error detector ==415309== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==415309== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==415309== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==415309== Parent PID: 413147 ==415309== ==415309== ==415309== FILE DESCRIPTORS: 9 open (3 std) at exit. ==415309== Open file descriptor 12: ==415309== at 0xF59C26D: pipe (pipe.c:29) ==415309== by 0x1977607D: ??? ==415309== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==415309== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415309== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415309== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==415309== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==415309== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==415309== by 0x1337B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==415309== by 0x12E7D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==415309== by 0x130F28: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==415309== by 0x130E23: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==415309== by 0x131437: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==415309== by 0x12CFD5: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==415309== ==415309== Open file descriptor 8: /dev/shm/open_mpi.0000 ==415309== at 0xF5A0C0C: __open_nocancel (open64_nocancel.c:39) ==415309== by 0xF524BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==415309== by 0xF132822: ??? ==415309== by 0xF13296F: ??? ==415309== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415309== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415309== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==415309== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==415309== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415309== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==415309== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==415309== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==415309== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==415309== by 0x1337B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==415309== by 0x12E7D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==415309== by 0x130F28: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==415309== by 0x130E23: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==415309== by 0x131437: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==415309== by 0x12CFD5: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==415309== ==415309== Open file descriptor 116: ==415309== ==415309== ==415309== Open file descriptor 113: ==415309== ==415309== ==415309== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==415309== ==415309== ==415309== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==415309== ==415309== ==415309== ==415309== HEAP SUMMARY: ==415309== in use at exit: 857,959 bytes in 12,109 blocks ==415309== total heap usage: 6,674,873 allocs, 6,662,764 frees, 9,199,475,471 bytes allocated ==415309== ==415309== LEAK SUMMARY: ==415309== definitely lost: 0 bytes in 0 blocks ==415309== indirectly lost: 0 bytes in 0 blocks ==415309== possibly lost: 0 bytes in 0 blocks ==415309== still reachable: 56 bytes in 3 blocks ==415309== suppressed: 857,903 bytes in 12,106 blocks ==415309== Reachable blocks (those to which a pointer was found) are not shown. ==415309== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==415309== ==415309== For lists of detected and suppressed errors, rerun with: -s ==415309== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)