==417298== Memcheck, a memory error detector ==417298== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==417298== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==417298== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==417298== Parent PID: 413147 ==417298== ==417298== ==417298== FILE DESCRIPTORS: 9 open (3 std) at exit. ==417298== Open file descriptor 12: ==417298== at 0xF5DE26D: pipe (pipe.c:29) ==417298== by 0x1977607D: ??? ==417298== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==417298== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==417298== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==417298== by 0xFEC9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==417298== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==417298== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==417298== by 0x1D75B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==417298== by 0x1CF0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==417298== by 0x1D2914: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==417298== by 0x1D27B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==417298== by 0x1D2E4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==417298== by 0x1CD515: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==417298== ==417298== Open file descriptor 8: /dev/shm/open_mpi.0000 ==417298== at 0xF5E2C0C: __open_nocancel (open64_nocancel.c:39) ==417298== by 0xF566BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==417298== by 0xF132822: ??? ==417298== by 0xF13296F: ??? ==417298== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==417298== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==417298== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==417298== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==417298== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==417298== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==417298== by 0xFEC9D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==417298== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==417298== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==417298== by 0x1D75B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==417298== by 0x1CF0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==417298== by 0x1D2914: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==417298== by 0x1D27B4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==417298== by 0x1D2E4B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==417298== by 0x1CD515: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==417298== ==417298== Open file descriptor 116: ==417298== ==417298== ==417298== Open file descriptor 113: ==417298== ==417298== ==417298== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==417298== ==417298== ==417298== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==417298== ==417298== ==417298== ==417298== HEAP SUMMARY: ==417298== in use at exit: 857,975 bytes in 12,110 blocks ==417298== total heap usage: 10,805,610 allocs, 10,793,500 frees, 2,374,515,000 bytes allocated ==417298== ==417298== LEAK SUMMARY: ==417298== definitely lost: 0 bytes in 0 blocks ==417298== indirectly lost: 0 bytes in 0 blocks ==417298== possibly lost: 0 bytes in 0 blocks ==417298== still reachable: 72 bytes in 4 blocks ==417298== suppressed: 857,903 bytes in 12,106 blocks ==417298== Reachable blocks (those to which a pointer was found) are not shown. ==417298== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==417298== ==417298== For lists of detected and suppressed errors, rerun with: -s ==417298== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)