==414950== Memcheck, a memory error detector ==414950== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414950== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414950== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==414950== Parent PID: 413147 ==414950== ==414950== ==414950== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414950== Open file descriptor 12: ==414950== at 0xF59C26D: pipe (pipe.c:29) ==414950== by 0x1977607D: ??? ==414950== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414950== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414950== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414950== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414950== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414950== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414950== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414950== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414950== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414950== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414950== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414950== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==414950== ==414950== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414950== at 0xF5A0C0C: __open_nocancel (open64_nocancel.c:39) ==414950== by 0xF524BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414950== by 0xF132822: ??? ==414950== by 0xF13296F: ??? ==414950== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414950== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414950== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414950== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414950== by 0x1123B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414950== by 0x111D4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414950== by 0xFECBD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414950== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414950== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414950== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==414950== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414950== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414950== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414950== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414950== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==414950== ==414950== Open file descriptor 116: ==414950== ==414950== ==414950== Open file descriptor 113: ==414950== ==414950== ==414950== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==414950== ==414950== ==414950== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414950== ==414950== ==414950== ==414950== HEAP SUMMARY: ==414950== in use at exit: 858,019 bytes in 12,113 blocks ==414950== total heap usage: 61,714 allocs, 49,601 frees, 1,543,369,709 bytes allocated ==414950== ==414950== LEAK SUMMARY: ==414950== definitely lost: 0 bytes in 0 blocks ==414950== indirectly lost: 0 bytes in 0 blocks ==414950== possibly lost: 0 bytes in 0 blocks ==414950== still reachable: 56 bytes in 3 blocks ==414950== suppressed: 857,963 bytes in 12,110 blocks ==414950== Reachable blocks (those to which a pointer was found) are not shown. ==414950== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414950== ==414950== For lists of detected and suppressed errors, rerun with: -s ==414950== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)