==414953== Memcheck, a memory error detector ==414953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==414953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==414953== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==414953== Parent PID: 413147 ==414953== ==414953== ==414953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==414953== Open file descriptor 12: ==414953== at 0x10A9526D: pipe (pipe.c:29) ==414953== by 0x1977607D: ??? ==414953== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414953== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414953== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414953== by 0xF28BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414953== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414953== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414953== by 0x16AAB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414953== by 0x162E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414953== by 0x1660EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414953== by 0x165F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414953== by 0x166623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414953== by 0x161225: main (TestPottsBasedCellPopulation.cpp:19) ==414953== ==414953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==414953== at 0x10A99C0C: __open_nocancel (open64_nocancel.c:39) ==414953== by 0x10A1DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==414953== by 0xF132822: ??? ==414953== by 0xF13296F: ??? ==414953== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414953== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414953== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==414953== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==414953== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414953== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==414953== by 0xF28BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==414953== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==414953== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==414953== by 0x16AAB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==414953== by 0x162E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==414953== by 0x1660EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==414953== by 0x165F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==414953== by 0x166623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==414953== by 0x161225: main (TestPottsBasedCellPopulation.cpp:19) ==414953== ==414953== Open file descriptor 116: ==414953== ==414953== ==414953== Open file descriptor 113: ==414953== ==414953== ==414953== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==414953== ==414953== ==414953== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==414953== ==414953== ==414953== ==414953== HEAP SUMMARY: ==414953== in use at exit: 858,019 bytes in 12,113 blocks ==414953== total heap usage: 80,947 allocs, 68,834 frees, 1,548,322,317 bytes allocated ==414953== ==414953== LEAK SUMMARY: ==414953== definitely lost: 0 bytes in 0 blocks ==414953== indirectly lost: 0 bytes in 0 blocks ==414953== possibly lost: 0 bytes in 0 blocks ==414953== still reachable: 56 bytes in 3 blocks ==414953== suppressed: 857,963 bytes in 12,110 blocks ==414953== Reachable blocks (those to which a pointer was found) are not shown. ==414953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==414953== ==414953== For lists of detected and suppressed errors, rerun with: -s ==414953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)