==422010== Memcheck, a memory error detector ==422010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==422010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==422010== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==422010== Parent PID: 413147 ==422010== ==422010== ==422010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==422010== Open file descriptor 12: ==422010== at 0xF4B526D: pipe (pipe.c:29) ==422010== by 0x1977607D: ??? ==422010== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422010== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422010== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422010== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422010== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422010== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422010== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422010== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422010== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422010== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422010== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422010== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==422010== ==422010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==422010== at 0xF4B9C0C: __open_nocancel (open64_nocancel.c:39) ==422010== by 0xF43DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==422010== by 0xF132822: ??? ==422010== by 0xF13296F: ??? ==422010== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422010== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422010== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422010== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422010== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422010== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422010== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422010== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422010== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422010== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422010== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422010== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422010== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422010== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422010== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==422010== ==422010== Open file descriptor 116: ==422010== ==422010== ==422010== Open file descriptor 113: ==422010== ==422010== ==422010== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==422010== ==422010== ==422010== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==422010== ==422010== ==422010== ==422010== HEAP SUMMARY: ==422010== in use at exit: 857,959 bytes in 12,109 blocks ==422010== total heap usage: 5,101,630 allocs, 5,089,521 frees, 1,977,885,362 bytes allocated ==422010== ==422010== LEAK SUMMARY: ==422010== definitely lost: 0 bytes in 0 blocks ==422010== indirectly lost: 0 bytes in 0 blocks ==422010== possibly lost: 0 bytes in 0 blocks ==422010== still reachable: 56 bytes in 3 blocks ==422010== suppressed: 857,903 bytes in 12,106 blocks ==422010== Reachable blocks (those to which a pointer was found) are not shown. ==422010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==422010== ==422010== For lists of detected and suppressed errors, rerun with: -s ==422010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)