==422057== Memcheck, a memory error detector ==422057== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==422057== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==422057== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==422057== Parent PID: 413147 ==422057== ==422057== ==422057== FILE DESCRIPTORS: 9 open (3 std) at exit. ==422057== Open file descriptor 12: ==422057== at 0x1096A26D: pipe (pipe.c:29) ==422057== by 0x1977407D: ??? ==422057== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422057== by 0x105B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422057== by 0x10552D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422057== by 0xF226D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422057== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422057== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422057== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==422057== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422057== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422057== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422057== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422057== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==422057== ==422057== Open file descriptor 8: /dev/shm/open_mpi.0000 ==422057== at 0x1096EC0C: __open_nocancel (open64_nocancel.c:39) ==422057== by 0x108F2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==422057== by 0x104B0822: ??? ==422057== by 0x104B096F: ??? ==422057== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422057== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422057== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422057== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422057== by 0x105B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422057== by 0x10552D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422057== by 0xF226D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422057== by 0xF0FD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422057== by 0xF0FD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422057== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==422057== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422057== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422057== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422057== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422057== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==422057== ==422057== Open file descriptor 116: ==422057== ==422057== ==422057== Open file descriptor 113: ==422057== ==422057== ==422057== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==422057== ==422057== ==422057== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==422057== ==422057== ==422057== ==422057== HEAP SUMMARY: ==422057== in use at exit: 857,959 bytes in 12,109 blocks ==422057== total heap usage: 3,095,343 allocs, 3,083,234 frees, 2,459,808,038 bytes allocated ==422057== ==422057== LEAK SUMMARY: ==422057== definitely lost: 0 bytes in 0 blocks ==422057== indirectly lost: 0 bytes in 0 blocks ==422057== possibly lost: 0 bytes in 0 blocks ==422057== still reachable: 56 bytes in 3 blocks ==422057== suppressed: 857,903 bytes in 12,106 blocks ==422057== Reachable blocks (those to which a pointer was found) are not shown. ==422057== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==422057== ==422057== For lists of detected and suppressed errors, rerun with: -s ==422057== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)