==422106== Memcheck, a memory error detector ==422106== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==422106== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==422106== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==422106== Parent PID: 413147 ==422106== ==422106== ==422106== FILE DESCRIPTORS: 9 open (3 std) at exit. ==422106== Open file descriptor 12: ==422106== at 0xD85926D: pipe (pipe.c:29) ==422106== by 0x1977407D: ??? ==422106== by 0x14D1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422106== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422106== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422106== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422106== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422106== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422106== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422106== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422106== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422106== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422106== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422106== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==422106== ==422106== Open file descriptor 8: /dev/shm/open_mpi.0000 ==422106== at 0xD85DC0C: __open_nocancel (open64_nocancel.c:39) ==422106== by 0xD7E1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==422106== by 0xD4D4822: ??? ==422106== by 0xD4D496F: ??? ==422106== by 0x14DC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422106== by 0x14DC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422106== by 0x14D79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422106== by 0x14D1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422106== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422106== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422106== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422106== by 0xD49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422106== by 0xD49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422106== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422106== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422106== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422106== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422106== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422106== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==422106== ==422106== Open file descriptor 116: ==422106== ==422106== ==422106== Open file descriptor 113: ==422106== ==422106== ==422106== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==422106== ==422106== ==422106== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==422106== ==422106== ==422106== ==422106== HEAP SUMMARY: ==422106== in use at exit: 857,959 bytes in 12,109 blocks ==422106== total heap usage: 37,227,519 allocs, 37,215,410 frees, 3,889,698,440 bytes allocated ==422106== ==422106== LEAK SUMMARY: ==422106== definitely lost: 0 bytes in 0 blocks ==422106== indirectly lost: 0 bytes in 0 blocks ==422106== possibly lost: 0 bytes in 0 blocks ==422106== still reachable: 56 bytes in 3 blocks ==422106== suppressed: 857,903 bytes in 12,106 blocks ==422106== Reachable blocks (those to which a pointer was found) are not shown. ==422106== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==422106== ==422106== For lists of detected and suppressed errors, rerun with: -s ==422106== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)