==422107== Memcheck, a memory error detector ==422107== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==422107== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==422107== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==422107== Parent PID: 413147 ==422107== ==422107== ==422107== FILE DESCRIPTORS: 9 open (3 std) at exit. ==422107== Open file descriptor 12: ==422107== at 0xF85126D: pipe (pipe.c:29) ==422107== by 0x1977407D: ??? ==422107== by 0x14D174CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422107== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422107== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422107== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422107== by 0xF4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422107== by 0xF49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422107== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422107== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422107== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422107== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422107== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422107== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==422107== ==422107== Open file descriptor 8: /dev/shm/open_mpi.0000 ==422107== at 0xF855C0C: __open_nocancel (open64_nocancel.c:39) ==422107== by 0xF7D9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==422107== by 0xF4CE822: ??? ==422107== by 0xF4CE96F: ??? ==422107== by 0x14DBC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422107== by 0x14DBC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422107== by 0x14D72922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==422107== by 0x14D172DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==422107== by 0x11152418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422107== by 0x110EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==422107== by 0xFDE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==422107== by 0xF4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==422107== by 0xF49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==422107== by 0x11C9B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==422107== by 0x1182D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==422107== by 0x11A55A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==422107== by 0x11A455: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==422107== by 0x11AA69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==422107== by 0x116AD5: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==422107== ==422107== Open file descriptor 116: ==422107== ==422107== ==422107== Open file descriptor 113: ==422107== ==422107== ==422107== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==422107== ==422107== ==422107== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==422107== ==422107== ==422107== ==422107== HEAP SUMMARY: ==422107== in use at exit: 857,959 bytes in 12,109 blocks ==422107== total heap usage: 1,818,417 allocs, 1,806,308 frees, 1,867,377,532 bytes allocated ==422107== ==422107== LEAK SUMMARY: ==422107== definitely lost: 0 bytes in 0 blocks ==422107== indirectly lost: 0 bytes in 0 blocks ==422107== possibly lost: 0 bytes in 0 blocks ==422107== still reachable: 56 bytes in 3 blocks ==422107== suppressed: 857,903 bytes in 12,106 blocks ==422107== Reachable blocks (those to which a pointer was found) are not shown. ==422107== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==422107== ==422107== For lists of detected and suppressed errors, rerun with: -s ==422107== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)