==160105== Memcheck, a memory error detector ==160105== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==160105== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==160105== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==160105== Parent PID: 144319 ==160105== ==160105== ==160105== FILE DESCRIPTORS: 9 open (3 std) at exit. ==160105== Open file descriptor 12: ==160105== at 0x1192F26D: pipe (pipe.c:29) ==160105== by 0x1A6DF07D: ??? ==160105== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==160105== by 0x11237418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==160105== by 0x111D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==160105== by 0xFEC7D38: PetscInitialize (pinit.c:924) ==160105== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==160105== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==160105== by 0x2254A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==160105== by 0x21CB9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==160105== by 0x22067C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==160105== by 0x220577: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==160105== by 0x220B8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==160105== by 0x21B395: main (TestCryptSimulation1d.cpp:18) ==160105== ==160105== Open file descriptor 8: /dev/shm/open_mpi.0000 ==160105== at 0x11933C0C: __open_nocancel (open64_nocancel.c:39) ==160105== by 0x118B7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==160105== by 0xFD69822: ??? ==160105== by 0xFD6996F: ??? ==160105== by 0x158F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==160105== by 0x158F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==160105== by 0x158AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==160105== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==160105== by 0x11237418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==160105== by 0x111D0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==160105== by 0xFEC7D38: PetscInitialize (pinit.c:924) ==160105== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==160105== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==160105== by 0x2254A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==160105== by 0x21CB9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==160105== by 0x22067C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==160105== by 0x220577: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==160105== by 0x220B8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==160105== by 0x21B395: main (TestCryptSimulation1d.cpp:18) ==160105== ==160105== Open file descriptor 115: ==160105== ==160105== ==160105== Open file descriptor 112: ==160105== ==160105== ==160105== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==160105== ==160105== ==160105== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==160105== ==160105== ==160105== ==160105== HEAP SUMMARY: ==160105== in use at exit: 835,578 bytes in 11,673 blocks ==160105== total heap usage: 4,123,371 allocs, 4,111,698 frees, 2,178,865,014 bytes allocated ==160105== ==160105== LEAK SUMMARY: ==160105== definitely lost: 0 bytes in 0 blocks ==160105== indirectly lost: 0 bytes in 0 blocks ==160105== possibly lost: 0 bytes in 0 blocks ==160105== still reachable: 56 bytes in 3 blocks ==160105== suppressed: 835,522 bytes in 11,670 blocks ==160105== Reachable blocks (those to which a pointer was found) are not shown. ==160105== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==160105== ==160105== For lists of detected and suppressed errors, rerun with: -s ==160105== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)