==189034== Memcheck, a memory error detector ==189034== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==189034== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==189034== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==189034== Parent PID: 187195 ==189034== ==189034== ==189034== FILE DESCRIPTORS: 9 open (3 std) at exit. ==189034== Open file descriptor 12: ==189034== at 0xF84926D: pipe (pipe.c:29) ==189034== by 0x196AE07D: ??? ==189034== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189034== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189034== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189034== by 0x10135D38: PetscInitialize (pinit.c:924) ==189034== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189034== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189034== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189034== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189034== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189034== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189034== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189034== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==189034== ==189034== Open file descriptor 8: /dev/shm/open_mpi.0000 ==189034== at 0xF84DC0C: __open_nocancel (open64_nocancel.c:39) ==189034== by 0xF7D1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==189034== by 0xF13A822: ??? ==189034== by 0xF13A96F: ??? ==189034== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189034== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189034== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189034== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189034== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189034== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189034== by 0x10135D38: PetscInitialize (pinit.c:924) ==189034== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189034== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189034== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189034== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189034== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189034== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189034== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189034== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==189034== ==189034== Open file descriptor 115: ==189034== ==189034== ==189034== Open file descriptor 112: ==189034== ==189034== ==189034== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==189034== ==189034== ==189034== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==189034== ==189034== ==189034== ==189034== HEAP SUMMARY: ==189034== in use at exit: 835,628 bytes in 11,677 blocks ==189034== total heap usage: 65,343 allocs, 53,666 frees, 1,541,945,061 bytes allocated ==189034== ==189034== LEAK SUMMARY: ==189034== definitely lost: 0 bytes in 0 blocks ==189034== indirectly lost: 0 bytes in 0 blocks ==189034== possibly lost: 0 bytes in 0 blocks ==189034== still reachable: 56 bytes in 3 blocks ==189034== suppressed: 835,572 bytes in 11,674 blocks ==189034== Reachable blocks (those to which a pointer was found) are not shown. ==189034== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==189034== ==189034== For lists of detected and suppressed errors, rerun with: -s ==189034== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)