==189020== Memcheck, a memory error detector ==189020== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==189020== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==189020== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==189020== Parent PID: 187195 ==189020== ==189020== ==189020== FILE DESCRIPTORS: 9 open (3 std) at exit. ==189020== Open file descriptor 12: ==189020== at 0xF8DA26D: pipe (pipe.c:29) ==189020== by 0x196AE07D: ??? ==189020== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189020== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189020== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189020== by 0x10135D38: PetscInitialize (pinit.c:924) ==189020== by 0xF18E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189020== by 0xF18E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189020== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189020== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189020== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189020== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189020== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189020== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==189020== ==189020== Open file descriptor 8: /dev/shm/open_mpi.0000 ==189020== at 0xF8DEC0C: __open_nocancel (open64_nocancel.c:39) ==189020== by 0xF862BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==189020== by 0xF1C9822: ??? ==189020== by 0xF1C996F: ??? ==189020== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189020== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189020== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189020== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189020== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189020== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189020== by 0x10135D38: PetscInitialize (pinit.c:924) ==189020== by 0xF18E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189020== by 0xF18E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189020== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189020== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189020== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189020== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189020== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189020== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==189020== ==189020== Open file descriptor 115: ==189020== ==189020== ==189020== Open file descriptor 112: ==189020== ==189020== ==189020== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==189020== ==189020== ==189020== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==189020== ==189020== ==189020== ==189020== HEAP SUMMARY: ==189020== in use at exit: 835,562 bytes in 11,673 blocks ==189020== total heap usage: 20,200,972 allocs, 20,189,299 frees, 2,764,698,588 bytes allocated ==189020== ==189020== LEAK SUMMARY: ==189020== definitely lost: 0 bytes in 0 blocks ==189020== indirectly lost: 0 bytes in 0 blocks ==189020== possibly lost: 0 bytes in 0 blocks ==189020== still reachable: 56 bytes in 3 blocks ==189020== suppressed: 835,506 bytes in 11,670 blocks ==189020== Reachable blocks (those to which a pointer was found) are not shown. ==189020== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==189020== ==189020== For lists of detected and suppressed errors, rerun with: -s ==189020== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)