==189587== Memcheck, a memory error detector ==189587== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==189587== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==189587== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==189587== Parent PID: 187195 ==189587== ==189587== ==189587== FILE DESCRIPTORS: 9 open (3 std) at exit. ==189587== Open file descriptor 12: ==189587== at 0x10DE726D: pipe (pipe.c:29) ==189587== by 0x196AE07D: ??? ==189587== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189587== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189587== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189587== by 0xF298D38: PetscInitialize (pinit.c:924) ==189587== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189587== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189587== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==189587== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189587== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189587== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189587== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189587== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==189587== ==189587== Open file descriptor 8: /dev/shm/open_mpi.0000 ==189587== at 0x10DEBC0C: __open_nocancel (open64_nocancel.c:39) ==189587== by 0x10D6FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==189587== by 0xF13A822: ??? ==189587== by 0xF13A96F: ??? ==189587== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189587== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189587== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189587== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189587== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189587== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189587== by 0xF298D38: PetscInitialize (pinit.c:924) ==189587== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189587== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189587== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==189587== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189587== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189587== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189587== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189587== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==189587== ==189587== Open file descriptor 115: ==189587== ==189587== ==189587== Open file descriptor 112: ==189587== ==189587== ==189587== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==189587== ==189587== ==189587== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==189587== ==189587== ==189587== ==189587== HEAP SUMMARY: ==189587== in use at exit: 835,562 bytes in 11,673 blocks ==189587== total heap usage: 9,757,927 allocs, 9,746,254 frees, 2,803,523,372 bytes allocated ==189587== ==189587== LEAK SUMMARY: ==189587== definitely lost: 0 bytes in 0 blocks ==189587== indirectly lost: 0 bytes in 0 blocks ==189587== possibly lost: 0 bytes in 0 blocks ==189587== still reachable: 56 bytes in 3 blocks ==189587== suppressed: 835,506 bytes in 11,670 blocks ==189587== Reachable blocks (those to which a pointer was found) are not shown. ==189587== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==189587== ==189587== For lists of detected and suppressed errors, rerun with: -s ==189587== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)