==189036== Memcheck, a memory error detector ==189036== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==189036== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==189036== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==189036== Parent PID: 187195 ==189036== ==189036== ==189036== FILE DESCRIPTORS: 9 open (3 std) at exit. ==189036== Open file descriptor 12: ==189036== at 0xF8EE26D: pipe (pipe.c:29) ==189036== by 0x196AE07D: ??? ==189036== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189036== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189036== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189036== by 0x1021ED38: PetscInitialize (pinit.c:924) ==189036== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189036== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189036== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189036== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189036== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189036== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189036== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189036== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==189036== ==189036== Open file descriptor 8: /dev/shm/open_mpi.0000 ==189036== at 0xF8F2C0C: __open_nocancel (open64_nocancel.c:39) ==189036== by 0xF876BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==189036== by 0xF13A822: ??? ==189036== by 0xF13A96F: ??? ==189036== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189036== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189036== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==189036== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==189036== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189036== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==189036== by 0x1021ED38: PetscInitialize (pinit.c:924) ==189036== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==189036== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==189036== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==189036== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==189036== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==189036== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==189036== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==189036== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==189036== ==189036== Open file descriptor 115: ==189036== ==189036== ==189036== Open file descriptor 112: ==189036== ==189036== ==189036== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==189036== ==189036== ==189036== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==189036== ==189036== ==189036== ==189036== HEAP SUMMARY: ==189036== in use at exit: 835,628 bytes in 11,677 blocks ==189036== total heap usage: 61,434 allocs, 49,757 frees, 1,540,644,718 bytes allocated ==189036== ==189036== LEAK SUMMARY: ==189036== definitely lost: 0 bytes in 0 blocks ==189036== indirectly lost: 0 bytes in 0 blocks ==189036== possibly lost: 0 bytes in 0 blocks ==189036== still reachable: 56 bytes in 3 blocks ==189036== suppressed: 835,572 bytes in 11,674 blocks ==189036== Reachable blocks (those to which a pointer was found) are not shown. ==189036== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==189036== ==189036== For lists of detected and suppressed errors, rerun with: -s ==189036== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)