==523659== Memcheck, a memory error detector ==523659== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==523659== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==523659== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==523659== Parent PID: 522133 ==523659== ==523659== ==523659== FILE DESCRIPTORS: 9 open (3 std) at exit. ==523659== Open file descriptor 12: ==523659== at 0xCF9B26D: pipe (pipe.c:29) ==523659== by 0x18AE407D: ??? ==523659== by 0x140814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==523659== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523659== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523659== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==523659== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==523659== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==523659== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==523659== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==523659== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==523659== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==523659== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==523659== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==523659== ==523659== Open file descriptor 8: /dev/shm/open_mpi.0000 ==523659== at 0xCF9FC0C: __open_nocancel (open64_nocancel.c:39) ==523659== by 0xCF23BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==523659== by 0xCBD4822: ??? ==523659== by 0xCBD496F: ??? ==523659== by 0x141266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523659== by 0x14126938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523659== by 0x140DC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523659== by 0x140812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==523659== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523659== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523659== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==523659== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==523659== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==523659== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==523659== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==523659== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==523659== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==523659== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==523659== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==523659== ==523659== Open file descriptor 115: ==523659== ==523659== ==523659== Open file descriptor 112: ==523659== ==523659== ==523659== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==523659== ==523659== ==523659== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==523659== ==523659== ==523659== ==523659== HEAP SUMMARY: ==523659== in use at exit: 858,019 bytes in 12,113 blocks ==523659== total heap usage: 63,848 allocs, 51,735 frees, 1,543,604,438 bytes allocated ==523659== ==523659== LEAK SUMMARY: ==523659== definitely lost: 0 bytes in 0 blocks ==523659== indirectly lost: 0 bytes in 0 blocks ==523659== possibly lost: 0 bytes in 0 blocks ==523659== still reachable: 56 bytes in 3 blocks ==523659== suppressed: 857,963 bytes in 12,110 blocks ==523659== Reachable blocks (those to which a pointer was found) are not shown. ==523659== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==523659== ==523659== For lists of detected and suppressed errors, rerun with: -s ==523659== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)