==531607== Memcheck, a memory error detector ==531607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==531607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==531607== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainTissue -malloc_debug -malloc_dump -memory_info ==531607== Parent PID: 522133 ==531607== ==531607== ==531607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==531607== Open file descriptor 12: ==531607== at 0xB4C926D: pipe (pipe.c:29) ==531607== by 0x1405B07D: ??? ==531607== by 0xF7F94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==531607== by 0xB843418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531607== by 0xB7DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531607== by 0x9EC3D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==531607== by 0x9D36153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==531607== by 0x9D361A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==531607== by 0x13BAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==531607== by 0x1361E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==531607== by 0x138956: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==531607== by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==531607== by 0x138E65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==531607== by 0x1349E5: main (TestExtendedBidomainTissue.cpp:18) ==531607== ==531607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==531607== at 0xB4CDC0C: __open_nocancel (open64_nocancel.c:39) ==531607== by 0xB451BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==531607== by 0x9D6A822: ??? ==531607== by 0x9D6A96F: ??? ==531607== by 0xF89E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531607== by 0xF89E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531607== by 0xF854922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531607== by 0xF7F92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==531607== by 0xB843418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531607== by 0xB7DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531607== by 0x9EC3D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==531607== by 0x9D36153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==531607== by 0x9D361A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==531607== by 0x13BAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==531607== by 0x1361E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==531607== by 0x138956: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==531607== by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==531607== by 0x138E65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==531607== by 0x1349E5: main (TestExtendedBidomainTissue.cpp:18) ==531607== ==531607== Open file descriptor 115: ==531607== ==531607== ==531607== Open file descriptor 112: ==531607== ==531607== ==531607== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainTissue_valgrind.txt ==531607== ==531607== ==531607== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==531607== ==531607== ==531607== ==531607== HEAP SUMMARY: ==531607== in use at exit: 858,003 bytes in 12,112 blocks ==531607== total heap usage: 129,431 allocs, 117,319 frees, 1,558,851,746 bytes allocated ==531607== ==531607== LEAK SUMMARY: ==531607== definitely lost: 0 bytes in 0 blocks ==531607== indirectly lost: 0 bytes in 0 blocks ==531607== possibly lost: 0 bytes in 0 blocks ==531607== still reachable: 24 bytes in 2 blocks ==531607== suppressed: 857,979 bytes in 12,110 blocks ==531607== Reachable blocks (those to which a pointer was found) are not shown. ==531607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==531607== ==531607== For lists of detected and suppressed errors, rerun with: -s ==531607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)