==523614== Memcheck, a memory error detector ==523614== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==523614== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==523614== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==523614== Parent PID: 522133 ==523614== ==523614== ==523614== FILE DESCRIPTORS: 9 open (3 std) at exit. ==523614== Open file descriptor 12: ==523614== at 0xE69526D: pipe (pipe.c:29) ==523614== by 0x18AE307D: ??? ==523614== by 0x12C794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==523614== by 0xE2E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523614== by 0xE27BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523614== by 0xCF72D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==523614== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==523614== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==523614== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==523614== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==523614== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==523614== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==523614== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==523614== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==523614== ==523614== Open file descriptor 8: /dev/shm/open_mpi.0000 ==523614== at 0xE699C0C: __open_nocancel (open64_nocancel.c:39) ==523614== by 0xE61DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==523614== by 0xCE19822: ??? ==523614== by 0xCE1996F: ??? ==523614== by 0x12D1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523614== by 0x12D1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523614== by 0x12CD4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==523614== by 0x12C792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==523614== by 0xE2E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523614== by 0xE27BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==523614== by 0xCF72D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==523614== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==523614== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==523614== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==523614== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==523614== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==523614== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==523614== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==523614== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==523614== ==523614== Open file descriptor 115: ==523614== ==523614== ==523614== Open file descriptor 112: ==523614== ==523614== ==523614== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==523614== ==523614== ==523614== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==523614== ==523614== ==523614== ==523614== HEAP SUMMARY: ==523614== in use at exit: 857,987 bytes in 12,112 blocks ==523614== total heap usage: 71,328 allocs, 59,216 frees, 1,544,382,495 bytes allocated ==523614== ==523614== LEAK SUMMARY: ==523614== definitely lost: 0 bytes in 0 blocks ==523614== indirectly lost: 0 bytes in 0 blocks ==523614== possibly lost: 0 bytes in 0 blocks ==523614== still reachable: 24 bytes in 2 blocks ==523614== suppressed: 857,963 bytes in 12,110 blocks ==523614== Reachable blocks (those to which a pointer was found) are not shown. ==523614== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==523614== ==523614== For lists of detected and suppressed errors, rerun with: -s ==523614== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)