==531313== Memcheck, a memory error detector ==531313== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==531313== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==531313== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==531313== Parent PID: 522133 ==531313== ==531313== ==531313== FILE DESCRIPTORS: 9 open (3 std) at exit. ==531313== Open file descriptor 12: ==531313== at 0x1159826D: pipe (pipe.c:29) ==531313== by 0x1A7A207D: ??? ==531313== by 0x158F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==531313== by 0x111E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531313== by 0x1117ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531313== by 0xFE52D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==531313== by 0xFD2A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==531313== by 0xFD2A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==531313== by 0x120D67: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==531313== by 0x11C5F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==531313== by 0x11E82A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==531313== by 0x11E726: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==531313== by 0x11ED39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==531313== by 0x11ADF5: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==531313== ==531313== Open file descriptor 8: /dev/shm/open_mpi.0000 ==531313== at 0x1159CC0C: __open_nocancel (open64_nocancel.c:39) ==531313== by 0x11520BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==531313== by 0x110DC822: ??? ==531313== by 0x110DC96F: ??? ==531313== by 0x159986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531313== by 0x15998938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531313== by 0x1594E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==531313== by 0x158F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==531313== by 0x111E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531313== by 0x1117ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==531313== by 0xFE52D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==531313== by 0xFD2A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==531313== by 0xFD2A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==531313== by 0x120D67: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==531313== by 0x11C5F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==531313== by 0x11E82A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==531313== by 0x11E726: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==531313== by 0x11ED39: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==531313== by 0x11ADF5: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==531313== ==531313== Open file descriptor 115: ==531313== ==531313== ==531313== Open file descriptor 112: ==531313== ==531313== ==531313== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==531313== ==531313== ==531313== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==531313== ==531313== ==531313== ==531313== HEAP SUMMARY: ==531313== in use at exit: 858,035 bytes in 12,113 blocks ==531313== total heap usage: 1,761,955 allocs, 1,749,842 frees, 1,719,438,280 bytes allocated ==531313== ==531313== LEAK SUMMARY: ==531313== definitely lost: 0 bytes in 0 blocks ==531313== indirectly lost: 0 bytes in 0 blocks ==531313== possibly lost: 0 bytes in 0 blocks ==531313== still reachable: 56 bytes in 3 blocks ==531313== suppressed: 857,979 bytes in 12,110 blocks ==531313== Reachable blocks (those to which a pointer was found) are not shown. ==531313== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==531313== ==531313== For lists of detected and suppressed errors, rerun with: -s ==531313== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)